RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 OR10T2Q8NGX3 314 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 TMEM209Q96SK2 561 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 VPS45Q9NRW7 570 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 MAP10Q9P2G4 905 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 CIDEBQ9UHD4 219 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 ST3GAL5Q9UNP4 418 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 DOCK4Q8N1I0 1966 aa24.56■■□□□ 1.52
CPNE1-202ENST00000352393 A0A0J9YYE9 177 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 NR5A2O00482 541 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 AKAP10O43572 662 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 BMP10O95393 424 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 MOCS2O96007 188 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-202ENST00000352393 MMP2P08253 660 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 ZNF865P0CJ78 1059 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-202ENST00000352393 CD86P42081 329 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 RANBP1P43487 201 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 MRPS6P82932 125 aaKnown RBP24.55■■□□□ 1.52
CPNE1-202ENST00000352393 IHHQ14623 411 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 TBC1D25Q3MII6 688 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 PRMT9Q6P2P2 845 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 SCD5Q86SK9 330 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 TRPC4APQ8TEL6 797 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 FATE1Q969F0 183 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 LRCH3Q96II8 777 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 CLK4Q9HAZ1 481 aaKnown RBP24.55■■□□□ 1.52
CPNE1-202ENST00000352393 NT5MQ9NPB1 228 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 SLC8A2Q9UPR5 921 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 DNAJC15Q9Y5T4 150 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 AQP12BA6NM10 295 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 SLC5A3P53794 718 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 EMP3P54852 163 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 ATP6V0D1P61421 351 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 FAM110CQ1W6H9 321 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 KCTD21Q4G0X4 260 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 INTS11Q5TA45 600 aaKnown RBP24.55■■□□□ 1.52
CPNE1-202ENST00000352393 LPCAT2Q7L5N7 544 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 METTL23Q86XA0 190 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 AQP12AQ8IXF9 295 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 FAM47BQ8NA70 645 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 HOPXQ9BPY8 73 aaPredicted RBP24.55■■□□□ 1.52
CPNE1-202ENST00000352393 GIT1Q9Y2X7 761 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 TRPM7Q96QT4 1865 aa24.55■■□□□ 1.52
CPNE1-202ENST00000352393 TRIM64CA6NLI5 447 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 FXYD1O00168 92 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 CCL22O00626 93 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 FDXRP22570 491 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 BRCC3P46736 316 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 MAXP61244 160 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 SH3BP2P78314 561 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 KIF19Q2TAC6 998 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 PAN2Q504Q3 1202 aaKnown RBP24.54■■□□□ 1.52
CPNE1-202ENST00000352393 EPHX4Q8IUS5 362 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 PHYKPLQ8IUZ5 450 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 HDAC10Q969S8 669 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 KATNAL1Q9BW62 490 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 TRIM15Q9C019 465 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 NDUFAF1Q9Y375 327 aa24.54■■□□□ 1.52
CPNE1-202ENST00000352393 DLGAP1O14490 977 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 CDK14O94921 469 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 PYGLP06737 847 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 HSD17B1P14061 328 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 CD1DP15813 335 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 CAPN3P20807 821 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 RENBPP51606 427 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 DCTN2Q13561 401 aaKnown RBP24.53■■□□□ 1.52
CPNE1-202ENST00000352393 TAF2Q6P1X5 1199 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 UMODL1-AS1Q8N2C9 162 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 MINDY1Q8N5J2 469 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 OR6P1Q8NGX9 317 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 ASB2Q96Q27 587 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 RGS18Q9NS28 235 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 GALNT8Q9NY28 637 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 SAC3D1A6NKF1 404 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 TNFRSF10BO14763 440 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 TNPO2O14787 897 aaKnown RBP24.53■■□□□ 1.52
CPNE1-202ENST00000352393 FGF4P08620 206 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 CDH13P55290 713 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 DSC2Q02487 901 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 TBCELQ5QJ74 424 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 PIK3R6Q5UE93 754 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 LCN8Q6JVE9 175 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 CD300LGQ6UXG3 332 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 GOLM1Q8NBJ4 401 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 AGPAT4Q9NRZ5 378 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 FLRT1Q9NZU1 646 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 PTGDR2Q9Y5Y4 395 aa24.53■■□□□ 1.52
CPNE1-202ENST00000352393 ANKRD36A6QL64 1941 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 DHRS12A0PJE2 317 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 OR51F1A6NGY5 319 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 MLLT6P55198 1093 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-202ENST00000352393 SLC10A7Q0GE19 358 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 BNIP2Q12982 314 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 KANK2Q63ZY3 851 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 SLC15A3Q8IY34 581 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 PTGR2Q8N8N7 351 aaPredicted RBP24.52■■□□□ 1.52
CPNE1-202ENST00000352393 TWIST2Q8WVJ9 160 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 BIRC8Q96P09 236 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 NMUR1Q9HB89 426 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 SMOXQ9NWM0 555 aa24.52■■□□□ 1.52
CPNE1-202ENST00000352393 GIMAP2Q9UG22 337 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms