RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 FAM83DQ9H4H8 585 aa13.73□□□□□ -0.21
SMC6-201ENST00000351948 TNPO3Q9Y5L0 923 aaKnown RBP13.73□□□□□ -0.21
SMC6-201ENST00000351948 CLUHO75153 1309 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 DNAJC8O75937 253 aaPredicted RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 GOT2P00505 430 aaKnown RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 ALPIP09923 528 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 PKMP14618 531 aaKnown RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 FECHP22830 423 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 GAD2Q05329 585 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 PRKG2Q13237 762 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 SLC44A1Q8WWI5 657 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 SPOCK2Q92563 424 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 PLEKHA8Q96JA3 519 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 HAPLN3Q96S86 360 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 HBEGFQ99075 208 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 SMAD5Q99717 465 aaKnown RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 PNPOQ9NVS9 261 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 VPS51Q9UID3 782 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 TCAF1Q9Y4C2 921 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 C2orf71A6NGG8 1288 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 UGT1A9O60656 530 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 GJB5O95377 273 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 UBTFL6P0CB48 400 aaPredicted RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 HAPLN1P10915 354 aaPredicted RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 FSHRP23945 695 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 LRPAP1P30533 357 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 SLC16A1P53985 500 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 CHRNB3Q05901 458 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 TGM3Q08188 693 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 KCTD13Q8WZ19 329 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 ATG10Q9H0Y0 220 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 UGT1A7Q9HAW7 530 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 UGT1A10Q9HAW8 530 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 UGT1A8Q9HAW9 530 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 NOD2Q9HC29 1040 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 KLHL3Q9UH77 587 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 RGS14O43566 566 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 LRATO95237 230 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 POP4O95707 220 aaKnown RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 HPGDP15428 266 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 FBXO46Q6PJ61 603 aaPredicted RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 UBE2R2Q712K3 238 aaPredicted RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 OR13C4Q8NGS5 318 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 BBS4Q96RK4 519 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 CDRT15Q96T59 188 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 KCTD14Q9BQ13 255 aaPredicted RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 HEPHQ9BQS7 1158 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 RABGEF1Q9UJ41 708 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 ULK1O75385 1050 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 PABPC1P11940 636 aaKnown RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 RPL38P63173 70 aaKnown RBP13.72□□□□□ -0.21
SMC6-201ENST00000351948 GRM2Q14416 872 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 ADAMTSL2Q86TH1 951 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 NIPA2Q8N8Q9 360 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 MAGEC3Q8TD91 643 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 GRHL1Q9NZI5 618 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 GULP1Q9UBP9 304 aa13.72□□□□□ -0.21
SMC6-201ENST00000351948 SERPINI2O75830 405 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 PTPN4P29074 926 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 CYP4F2P78329 520 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 SLC25A11Q02978 314 aaKnown RBP13.71□□□□□ -0.21
SMC6-201ENST00000351948 Q6ZVU0 165 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 EBF3Q9H4W6 596 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 TDP1Q9NUW8 608 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 CYTH4Q9UIA0 394 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 EDIL3O43854 480 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 MAGEC1O60732 1142 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 PRNPP04156 253 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 COL6A1P12109 1028 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 COX7A2P14406 83 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 SPAM1P38567 509 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 ARHGAP36Q6ZRI8 547 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 STK39Q9UEW8 545 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 MYO7AQ13402 2215 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 MTX2O75431 263 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 RFPL2O75678 378 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 HGFP14210 728 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 CREB1P16220 341 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 MLLT6P55198 1093 aaPredicted RBP13.71□□□□□ -0.21
SMC6-201ENST00000351948 TRAF2Q12933 501 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 UBAP2LQ14157 1087 aaKnown RBP13.71□□□□□ -0.21
SMC6-201ENST00000351948 SLC1A5Q15758 541 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 PCDH12Q9NPG4 1184 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 PDLIM7Q9NR12 457 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 CROTQ9UKG9 612 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 SCML2Q9UQR0 700 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 ASB3Q9Y575 518 aa13.71□□□□□ -0.21
SMC6-201ENST00000351948 S100A3P33764 101 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 GSSP48637 474 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 CORO7P57737 925 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 VAC14Q08AM6 782 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 MSLNQ13421 630 aaPredicted RBP13.71□□□□□ -0.22
SMC6-201ENST00000351948 RAB6CQ53S08 254 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 VITQ6UXI7 678 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 TTC9BQ8N6N2 239 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 ZNF784Q8NCA9 323 aaPredicted RBP13.71□□□□□ -0.22
SMC6-201ENST00000351948 SPPL2AQ8TCT8 520 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 NTAN1Q96AB6 310 aa13.71□□□□□ -0.22
SMC6-201ENST00000351948 GPR88Q9GZN0 384 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms