RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 GPR158Q5T848 1215 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 FAM217AQ8IXS0 508 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 CPSF7Q8N684 471 aaKnown RBP16.7■□□□□ 0.26
SAMM50-201ENST00000350028 PNPLA1Q8N8W4 532 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 MDGA1Q8NFP4 955 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 OR4K2Q8NGD2 314 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 ADAMTS19Q8TE59 1207 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 SLC22A12Q96S37 553 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 FEM1AQ9BSK4 669 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 THTPAQ9BU02 230 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 HACD3Q9P035 362 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 LHX3Q9UBR4 397 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 LSM7Q9UK45 103 aaKnown RBP16.7■□□□□ 0.26
SAMM50-201ENST00000350028 PCDHGC4Q9Y5F7 938 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 OR51B4Q9Y5P0 310 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 CPQQ9Y646 472 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 NEMP2A6NFY4 417 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 ANKRD66B4E2M5 251 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 ZBTB14O43829 449 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 SNAP91O60641 907 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 SLC4A1P02730 911 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 PDHA1P08559 390 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 COX4I1P13073 169 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 CSF2RAP15509 400 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 GNAZP19086 355 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 MZF1P28698 734 aaPredicted RBP16.7■□□□□ 0.26
SAMM50-201ENST00000350028 LSM12Q3MHD2 195 aaKnown RBP16.7■□□□□ 0.26
SAMM50-201ENST00000350028 TXNDC8Q6A555 127 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 ISCA2Q86U28 154 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 ULK2Q8IYT8 1036 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 PHTF2Q8N3S3 785 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 POU5F2Q8N7G0 328 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 YME1L1Q96TA2 773 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 TRMOQ9BU70 441 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 NUF2Q9BZD4 464 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 WDR55Q9H6Y2 383 aaPredicted RBP16.7■□□□□ 0.26
SAMM50-201ENST00000350028 VPS28Q9UK41 221 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 VPS9D1Q9Y2B5 631 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 ZNF510Q9Y2H8 683 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 C15orf41Q9Y2V0 281 aa16.7■□□□□ 0.26
SAMM50-201ENST00000350028 GOLGA8QA0A0J9YX86 632 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 GOLGA8OA6NCC3 632 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 GOLGA8NF8WBI6 632 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 PFDN6O15212 129 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 SMIM24O75264 130 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 CD1DP15813 335 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 IMPDH1P20839 514 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 TRMT5Q32P41 509 aaKnown RBP16.69■□□□□ 0.26
SAMM50-201ENST00000350028 ACSBG2Q5FVE4 666 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 LINGO4Q6UY18 593 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 DCAF4L2Q8NA75 395 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 MRPS31Q92665 395 aaKnown RBP16.69■□□□□ 0.26
SAMM50-201ENST00000350028 USP13Q92995 863 aaPredicted RBP16.69■□□□□ 0.26
SAMM50-201ENST00000350028 ANKRD27Q96NW4 1050 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 SHCBP1LQ9BZQ2 653 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 ZBP1Q9H171 429 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 C11orf49Q9H6J7 331 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 SYTL2Q9HCH5 934 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 DNMT3BQ9UBC3 853 aaKnown RBP16.69■□□□□ 0.26
SAMM50-201ENST00000350028 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.69■□□□□ 0.26
SAMM50-201ENST00000350028 OBSL1O75147 1896 aa16.69■□□□□ 0.26
SAMM50-201ENST00000350028 NEMP1O14524 444 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 KIAA0355O15063 1070 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 NDUFS3O75489 264 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 BAIAP3O94812 1187 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 CTSAP10619 480 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 THRAP10827 490 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 KCNA5P22460 613 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 EPHA3P29320 983 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 CDC25CP30307 473 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 GTF2A1P52655 376 aaPredicted RBP16.68■□□□□ 0.26
SAMM50-201ENST00000350028 RHOAP61586 193 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 NFKB2Q00653 900 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 TIAL1Q01085 375 aaKnown RBP eCLIP16.68■□□□□ 0.26
SAMM50-201ENST00000350028 SATB1Q01826 763 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 TRAF2Q12933 501 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 PDAP1Q13442 181 aaKnown RBP16.68■□□□□ 0.26
SAMM50-201ENST00000350028 SH2D4BQ5SQS7 431 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 PIM3Q86V86 326 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 TMEM199Q8N511 208 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 WDR60Q8WVS4 1066 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 STMN2Q93045 179 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 L3HYPDHQ96EM0 354 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 ALG14Q96F25 216 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 RTKNQ9BST9 563 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 CCDC68Q9H2F9 335 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 ALG9Q9H6U8 611 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 CYP4F12Q9HCS2 524 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 GTSE1Q9NYZ3 720 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 ARHGAP26Q9UNA1 814 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 ANKRD36A6QL64 1941 aa16.68■□□□□ 0.26
SAMM50-201ENST00000350028 PSMG1O95456 288 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 SP100P23497 879 aaPredicted RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 GABRR2P28476 465 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 CSKP41240 450 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 SLC7A9P82251 487 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 SLC25A3Q00325 362 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 CDH18Q13634 790 aa16.67■□□□□ 0.26
SAMM50-201ENST00000350028 ZRSR2Q15696 482 aaKnown RBP16.67■□□□□ 0.26
SAMM50-201ENST00000350028 LRRC26Q2I0M4 334 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms