RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 GEN1Q17RS7 908 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 MARC1Q5VT66 337 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 DHFR2Q86XF0 187 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 CCDC117Q8IWD4 279 aaPredicted RBP18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 PTGR2Q8N8N7 351 aaPredicted RBP18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 RSPH1Q8WYR4 309 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 ARNT2Q9HBZ2 717 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 RGS18Q9NS28 235 aa18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 DUS2Q9NX74 493 aaKnown RBP18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 ABI2Q9NYB9 513 aaPredicted RBP18.12■□□□□ 0.49
PTP4A3-202ENST00000349124 A0A0J9YYE9 177 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 ARHGAP10A1A4S6 786 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 H3BMM5 538 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 NME4O00746 187 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 CES1P23141 567 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 RPL9P32969 192 aaKnown RBP18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 OR4D1Q15615 310 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 PSMD5Q16401 504 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 C8orf82Q6P1X6 216 aaPredicted RBP18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 TRIML2Q8N7C3 387 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 FAR2Q96K12 515 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 PARK7Q99497 189 aaKnown RBP18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 ATP13A1Q9HD20 1204 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 MID1IP1Q9NPA3 183 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 SLC45A1Q9Y2W3 748 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 GIT1Q9Y2X7 761 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 TRPV2Q9Y5S1 764 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 PIP5K1BO14986 540 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 HTRA2O43464 458 aaPredicted RBP18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 B4GALT3O60512 393 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 SRP72O76094 671 aaKnown RBP18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 HMBSP08397 361 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 LINC00032P0C843 101 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 CDH2P19022 906 aaPredicted RBP18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 CAPN3P20807 821 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 HOXC8P31273 242 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 HSPA13P48723 471 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 NDST2P52849 883 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 NR1H2P55055 460 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 USP41Q3LFD5 358 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 GNASQ5JWF2 1037 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 CARM1Q86X55 608 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 SPATA2LQ8IUW3 424 aaPredicted RBP18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 OR13C4Q8NGS5 318 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 BLOC1S5Q8TDH9 187 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 IGSF8Q969P0 613 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 CCDC126Q96EE4 140 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 MYEOVQ96EZ4 313 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 TUBB1Q9H4B7 451 aa18.11■□□□□ 0.49
PTP4A3-202ENST00000349124 LDB2O43679 373 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 USP46P62068 366 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 MAPRE2Q15555 327 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 SLC14A2Q15849 920 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 SLC39A12Q504Y0 691 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 CALML6Q8TD86 181 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 TRPC4APQ8TEL6 797 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 PLK2Q9NYY3 685 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 PADI3Q9ULW8 664 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 DMTF1Q9Y222 760 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 NYNRINQ9P2P1 1898 aaKnown RBP18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 MROH6A6NGR9 719 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 WISP3O95389 354 aaPredicted RBP18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 CLIC3O95833 236 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 GRK4P32298 578 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 RENBPP51606 427 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 TXNL4AP83876 142 aaKnown RBP18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 SAMD4BQ5PRF9 694 aaKnown RBP18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 TAF2Q6P1X5 1199 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 DDIASQ8IXT1 998 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 AFAP1L2Q8N4X5 818 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 SMIM14Q96QK8 99 aa18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 CNOT11Q9UKZ1 510 aaKnown RBP18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 DICER1Q9UPY3 1922 aaKnown RBP18.1■□□□□ 0.49
PTP4A3-202ENST00000349124 MUSKO15146 869 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 SOAT2O75908 522 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 H6PDO95479 791 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 MTHFD2P13995 350 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 TRAP1Q12931 704 aaKnown RBP18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 GALNT3Q14435 633 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 KRT80Q6KB66 452 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 SCIMPQ6UWF3 145 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 MIB1Q86YT6 1006 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 SLC22A9Q8IVM8 553 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 FAM47BQ8NA70 645 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 ARRDC2Q8TBH0 407 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 RNF217Q8TC41 542 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 VPS45Q9NRW7 570 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 ATXN10Q9UBB4 475 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 IKZF3Q9UKT9 509 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 GOT2P00505 430 aaKnown RBP18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 ATXN1LP0C7T5 689 aaKnown RBP18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 CD1DP15813 335 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 ACVRL1P37023 503 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 HERVK_113P63132 956 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 PLOD1Q02809 727 aaPredicted RBP18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 NHSL2Q5HYW2 709 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 FAM45BPQ6NSW5 357 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 IFNEQ86WN2 208 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 SLC15A3Q8IY34 581 aa18.09■□□□□ 0.49
PTP4A3-202ENST00000349124 CBR4Q8N4T8 237 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms