RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 SYT16Q17RD7 645 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 CYBRD1Q53TN4 286 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 CCNYL2Q5T2Q4 361 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 PMF1Q6P1K2 205 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 RAB2BQ8WUD1 216 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 CTRCQ99895 268 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 NIFKQ9BYG3 293 aaKnown RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 MROQ9BYG7 248 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 IRF2BPLQ9H1B7 796 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 ZNF302Q9NR11 478 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 PCP4L1A6NKN8 68 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 MSCO60682 206 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 UGT2B4P06133 528 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 HSPA1AP0DMV8 641 aaKnown RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 HSPA1BP0DMV9 641 aaKnown RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 TTKP33981 857 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 NFYCQ13952 458 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 GOLGA7BQ2TAP0 167 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 PYCR3Q53H96 274 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 TRAF7Q6Q0C0 670 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 MMAAQ8IVH4 418 aaKnown RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 TXNDC5Q8NBS9 432 aaKnown RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 SLC10A4Q96EP9 437 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 OTUD5Q96G74 571 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 CENPNQ96H22 339 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 DEPDC7Q96QD5 511 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 PRM3Q9NNZ6 103 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 PLSCR3Q9NRY6 295 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 SLAMF8Q9P0V8 285 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 PPP1R1BQ9UD71 204 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 CDH7Q9ULB5 785 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 FNDC3AQ9Y2H6 1198 aaKnown RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 PCDHB3Q9Y5E6 796 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 ILVBLA1L0T0 632 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 C2CD4BA6NLJ0 364 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 ARPC2O15144 300 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 OGTO15294 1046 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 CRCPO75575 148 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 LRIG2O94898 1065 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 DDX5P17844 614 aaKnown RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 NDST1P52848 882 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 SP2Q02086 613 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 SURF1Q15526 300 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 GPR162Q16538 588 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 BOLA3Q53S33 107 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 NEK5Q6P3R8 708 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 PLEKHG7Q6ZR37 379 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 ZNF354CQ86Y25 554 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 MIER2Q8N344 545 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 DTX3Q8N9I9 347 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 KDM1BQ8NB78 822 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 ATL1Q8WXF7 558 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 ATG4CQ96DT6 458 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 SGIP1Q9BQI5 828 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 BCO2Q9BYV7 579 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 RPAP3Q9H6T3 665 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 RABL2BQ9UNT1 228 aa15.18■□□□□ 0.02
PTBP1-201ENST00000349038 MTF2Q9Y483 593 aaPredicted RBP15.18■□□□□ 0.02
PTBP1-201ENST00000349038 A0A0A0MRY4 1105 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 LOC100506127A0A0U1RQW1 187 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 FADS2O95864 444 aaKnown RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 C8BP07358 591 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 NFICP08651 508 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 SPESP1Q6UW49 350 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 CYS1Q717R9 158 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 TMEM126BQ8IUX1 230 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 CEP97Q8IW35 865 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 SLC22A15Q8IZD6 547 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 SCML4Q8N228 414 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 OR13F1Q8NGS4 319 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 HMGCLL1Q8TB92 370 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 CNIH3Q8TBE1 160 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 RDH11Q8TC12 318 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 SPPL2BQ8TCT7 592 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 BIRC7Q96CA5 298 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 CELF6Q96J87 481 aaKnown RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 SPATA13Q96N96 652 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 KCNA7Q96RP8 456 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.17■□□□□ 0.024e-7■■■□□ 18.8
PTBP1-201ENST00000349038 NUP205Q92621 2012 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 LRRC14BA6NHZ5 514 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 HS6ST1O60243 411 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 FYNP06241 537 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 MBL2P11226 248 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 MYCLP1P12525 358 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 SPNP16150 400 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 ENDOUP21128 410 aaKnown RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 FMO3P31513 532 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 CLK1P49759 484 aaKnown RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 MAP1SQ66K74 1059 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 C4orf22Q6V702 233 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 ZNF567Q8N184 647 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 CELF2-AS1Q8N7Q2 184 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 FAM83FQ8NEG4 500 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 LILRB4Q8NHJ6 448 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 TRAPPC12Q8WVT3 735 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 GAD1Q99259 594 aa15.17■□□□□ 0.02
PTBP1-201ENST00000349038 KCTD14Q9BQ13 255 aaPredicted RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 MRPL4Q9BYD3 311 aaKnown RBP15.17■□□□□ 0.02
PTBP1-201ENST00000349038 SEZ6LQ9BYH1 1024 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms