RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 DEF8Q6ZN54 512 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 MAB21L3Q8N8X9 362 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 ABI2Q9NYB9 513 aaPredicted RBP13.33□□□□□ -0.28
COL6A3-202ENST00000347401 LGALS13Q9UHV8 139 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 FER1L6Q2WGJ9 1857 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 PRMT3O60678 531 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 CCNDBP1O95273 360 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 RLN1P04808 185 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 SUPT20HL2P0C7V6 817 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 TAS2R41P59536 307 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 ARF3P61204 181 aaPredicted RBP13.33□□□□□ -0.28
COL6A3-202ENST00000347401 ADAM8P78325 824 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 ARF1P84077 181 aaKnown RBP13.33□□□□□ -0.28
COL6A3-202ENST00000347401 ZNF446Q9NWS9 450 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 RFXANKO14593 260 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 FGF1P05230 155 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 SLC6A4P31645 630 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 OCLNQ16625 522 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 CPNE9Q8IYJ1 553 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 MBOAT7Q96N66 472 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 KMOO15229 486 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 PLIN3O60664 434 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 ITGA2BP08514 1039 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 MYBL2P10244 700 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 ACO1P21399 889 aaKnown RBP13.33□□□□□ -0.28
COL6A3-202ENST00000347401 GLRA2P23416 452 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 C15orf59Q2T9L4 293 aaPredicted RBP13.33□□□□□ -0.28
COL6A3-202ENST00000347401 KCNQ5Q9NR82 932 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 TSPAN16Q9UKR8 245 aa13.33□□□□□ -0.28
COL6A3-202ENST00000347401 OR10H3O60404 316 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 CALCAP01258 141 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 BAATQ14032 418 aaPredicted RBP13.32□□□□□ -0.28
COL6A3-202ENST00000347401 MPP2Q14168 576 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 HLFQ16534 295 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 EGFLAMQ63HQ2 1017 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 TMEM17Q86X19 198 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 MPP5Q8N3R9 675 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 FAM151AQ8WW52 585 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 C17orf102A2RUQ5 167 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 AIREO43918 545 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 ANGPTL1O95841 491 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 ACOT1Q86TX2 421 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 MKS1Q9NXB0 559 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 ALOX15BO15296 676 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 PRKD3O94806 890 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 TBX4P57082 545 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 BNIP1Q12981 228 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 OVOS1Q6IE37 1185 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 OR52E6Q96RD3 313 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 CTSKP43235 329 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 CACNB2Q08289 660 aaPredicted RBP13.32□□□□□ -0.28
COL6A3-202ENST00000347401 KCNA10Q16322 511 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 DPY19L1Q2PZI1 675 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 CBWD6Q4V339 395 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 CPNE2Q96FN4 548 aaPredicted RBP13.32□□□□□ -0.28
COL6A3-202ENST00000347401 TDRD3Q9H7E2 651 aaKnown RBP13.32□□□□□ -0.28
COL6A3-202ENST00000347401 ABCC13Q9NSE7 274 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 PDE10AQ9Y233 779 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 NFAT5O94916 1531 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 WRBO00258 174 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 HLA-DQA2P01906 255 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 ASLP04424 464 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 TPSB2P20231 275 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 STARD3Q14849 445 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 TPSAB1Q15661 275 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 ADNP2Q6IQ32 1131 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 FBXO30Q8TB52 745 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 PDE2AO00408 941 aaPredicted RBP13.32□□□□□ -0.28
COL6A3-202ENST00000347401 AZIN1O14977 448 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 CDK18Q07002 472 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 ARMC12Q5T9G4 340 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 OR8H3Q8N146 312 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 ZNF548Q8NEK5 533 aaPredicted RBP13.32□□□□□ -0.28
COL6A3-202ENST00000347401 HSFY1Q96LI6 401 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 PANX1Q96RD7 426 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 MARCH7Q9H992 704 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 CXorf21Q9HAI6 301 aa13.32□□□□□ -0.28
COL6A3-202ENST00000347401 FAM237BA0A1B0GVD1 139 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 ISPDA4D126 451 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 TFECO14948 347 aaPredicted RBP13.31□□□□□ -0.28
COL6A3-202ENST00000347401 CBWD1Q9BRT8 395 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 ERCC6L2Q5T890 1561 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 FOSL1P15407 271 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 SETMARQ53H47 684 aaPredicted RBP13.31□□□□□ -0.28
COL6A3-202ENST00000347401 VWA5B1Q5TIE3 1220 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 TSEN2Q8NCE0 465 aaKnown RBP13.31□□□□□ -0.28
COL6A3-202ENST00000347401 RSL1D1O76021 490 aaKnown RBP13.31□□□□□ -0.28
COL6A3-202ENST00000347401 MPP1Q00013 466 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 BMPR2Q13873 1038 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 BBS12Q6ZW61 710 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 CPSF7Q8N684 471 aaKnown RBP13.31□□□□□ -0.28
COL6A3-202ENST00000347401 OR2T12Q8NG77 320 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 TTLL2Q9BWV7 592 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 KCNE2Q9Y6J6 123 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 OR5F1O95221 314 aa13.31□□□□□ -0.28
COL6A3-202ENST00000347401 C6orf222P0C671 652 aaPredicted RBP13.31□□□□□ -0.28
COL6A3-202ENST00000347401 TOB1P50616 345 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms