RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 LIPIQ6XZB0 460 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 IQCHQ86VS3 1027 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 ZCCHC9Q8N567 271 aaKnown RBP11.86□□□□□ -0.51
SNCA-202ENST00000345009 DENND6BQ8NEG7 585 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 TRIB3Q96RU7 358 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 LYSMD1Q96S90 227 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 TBL1YQ9BQ87 522 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 GPR63Q9BZJ6 419 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 ZDHHC5Q9C0B5 715 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 CDH19Q9H159 772 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 RAB6BQ9NRW1 208 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 SLC6A14Q9UN76 642 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 HS3ST3A1Q9Y663 406 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 ANKRD36A6QL64 1941 aa11.86□□□□□ -0.51
SNCA-202ENST00000345009 NPIPB15A6NHN6 443 aaPredicted RBP11.85□□□□□ -0.51
SNCA-202ENST00000345009 WNT9AO14904 365 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 GFRA3O60609 400 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 URI1O94763 535 aaPredicted RBP11.85□□□□□ -0.51
SNCA-202ENST00000345009 METTL18O95568 372 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 AP2A1O95782 977 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 KRT14P02533 472 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 APRTP07741 180 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 ALPIP09923 528 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 ZNF806P0C7X5 589 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 C6P13671 934 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 ITIH2P19823 946 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 CD38P28907 300 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 RPL22P35268 128 aaKnown RBP11.85□□□□□ -0.51
SNCA-202ENST00000345009 ATXN3P54252 364 aaPredicted RBP11.85□□□□□ -0.51
SNCA-202ENST00000345009 CDK16Q00536 496 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 PDE1BQ01064 536 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 LAMB3Q13751 1172 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 GALNT3Q14435 633 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 IHHQ14623 411 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 AGERQ15109 404 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 CSRP2Q16527 193 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 TRIM61Q5EBN2 209 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 SIRPB2Q5JXA9 342 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 PEAR1Q5VY43 1037 aaPredicted RBP11.85□□□□□ -0.51
SNCA-202ENST00000345009 LRRC66Q68CR7 880 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 SLC23A3Q6PIS1 610 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 CRTC1Q6UUV9 634 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 IL27RAQ6UWB1 636 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 RANBP10Q6VN20 620 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 SYDE1Q6ZW31 735 aaPredicted RBP11.85□□□□□ -0.51
SNCA-202ENST00000345009 DCP2Q8IU60 420 aaKnown RBP11.85□□□□□ -0.51
SNCA-202ENST00000345009 NRSN1Q8IZ57 195 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 SLC25A41Q8N5S1 370 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 MFSD2AQ8NA29 543 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 KLK6Q92876 244 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 KLHDC7BQ96G42 594 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 MRGPRX2Q96LB1 330 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 FICDQ9BVA6 458 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 ZFYVE1Q9HBF4 777 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 ETNK1Q9HBU6 452 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 TM9SF3Q9HD45 589 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 SMARCAL1Q9NZC9 954 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 PKD2L2Q9NZM6 624 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 PCYOX1Q9UHG3 505 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 GGT7Q9UJ14 662 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 ZFR2Q9UPR6 939 aaKnown RBP11.85□□□□□ -0.51
SNCA-202ENST00000345009 CACNA1EQ15878 2313 aa11.85□□□□□ -0.51
SNCA-202ENST00000345009 CEP192Q8TEP8 1941 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 C2orf81A6NN90 581 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 A6NNZ2 444 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 C10orf142B7Z368 130 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 PDE2AO00408 941 aaPredicted RBP11.84□□□□□ -0.51
SNCA-202ENST00000345009 VILLO15195 856 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 SPINT1O43278 529 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 DFNA5O60443 496 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 RECQL5O94762 991 aaPredicted RBP11.84□□□□□ -0.51
SNCA-202ENST00000345009 CRTAMO95727 393 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 AGTP01019 485 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 PYGLP06737 847 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 GCGRP47871 477 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 CSNK1EP49674 416 aaKnown RBP11.84□□□□□ -0.51
SNCA-202ENST00000345009 BASP1P80723 227 aaKnown RBP11.84□□□□□ -0.51
SNCA-202ENST00000345009 SEMG2Q02383 582 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 SPEM2Q0P670 501 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 RALGDSQ12967 914 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 GPS1Q13098 491 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 SEMA5AQ13591 1074 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 CNGA3Q16281 694 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 PLA2G2CQ5R387 149 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 ZDHHC20Q5W0Z9 365 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 PPP1R21Q6ZMI0 780 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 MAATS1Q7Z4T9 603 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 KLHDC8BQ8IXV7 354 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 DNAAF3Q8N9W5 541 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 MNS1Q8NEH6 495 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 C1orf216Q8TAB5 229 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 NUS1Q96E22 293 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 ARNT2Q9HBZ2 717 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 SEMA4GQ9NTN9 838 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 TMEM74BQ9NUR3 256 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.84□□□□□ -0.51
SNCA-202ENST00000345009 CDC23Q9UJX2 597 aa11.84□□□□□ -0.51
SNCA-202ENST00000345009 RALGAPA1Q6GYQ0 2036 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms