RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 POLR3BQ9NW08 1133 aaPredicted RBP16.36■□□□□ 0.21
CEACAM1-202ENST00000344391 C1orf232A0A0U1RR37 186 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 IQANK1A0A1B0GTG1 560 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 CCDC162PA2VCL2 907 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 KPNA3O00505 521 aaPredicted RBP16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 STX7O15400 261 aaKnown RBP16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 CLDN7O95471 211 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 SLC4A1P02730 911 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 WASP42768 502 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 SERPINB9P50453 376 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 MAGOHP61326 146 aaKnown RBP16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 PRAMEP78395 509 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 MICALCLQ6ZW33 695 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 OR6P1Q8NGX9 317 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 FAM167BQ9BTA0 163 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 SUDS3Q9H7L9 328 aaPredicted RBP16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 NSMCE4AQ9NXX6 385 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 B4GALT6Q9UBX8 382 aa16.35■□□□□ 0.21
CEACAM1-202ENST00000344391 FOXO6A8MYZ6 492 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 UPK3BL1B0FP48 263 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 UPK3BL2E5RIL1 263 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 GOT2P00505 430 aaKnown RBP16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 ITGB7P26010 798 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 NTSR1P30989 418 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 GP5P40197 560 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 CAMK2GQ13555 558 aaPredicted RBP16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 C2orf27AQ580R0 203 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 GRTP1Q5TC63 336 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 LGSNQ5TDP6 509 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 PARS2Q7L3T8 475 aaKnown RBP16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 PTAR1Q7Z6K3 402 aaPredicted RBP16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 STRA8Q7Z7C7 330 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 DSG4Q86SJ6 1040 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 TSPAN33Q86UF1 283 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 TRABD2AQ86V40 505 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 EXOC3L1Q86VI1 746 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 ADHFE1Q8IWW8 467 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 LMNTD2Q8IXW0 634 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 CALML6Q8TD86 181 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 ARRDC3Q96B67 414 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 GABRG3Q99928 467 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 MCMBPQ9BTE3 642 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 BPIFA1Q9NP55 256 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 TXNDC16Q9P2K2 825 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 DUSP12Q9UNI6 340 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 ZNF106Q9H2Y7 1883 aaKnown RBP16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 HMX2A2RU54 273 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 OR51F1A6NGY5 319 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 A8MX80 341 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 H7C0S8 307 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 KRT37O76014 449 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 KRT38O76015 456 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 IL1BP01584 269 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 SNRPAP09012 282 aaKnown RBP16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 KRT15P19012 456 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 LHCGRP22888 699 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 CNTFP26441 200 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 HADHAP40939 763 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 METAP1P53582 386 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 CSE1LP55060 971 aaKnown RBP16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 SEMG2Q02383 582 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 POM121L1PQ3SYA9 428 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 LRRC73Q5JTD7 316 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 TTC7BQ86TV6 843 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 DENND6AQ8IWF6 608 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 IL17RCQ8NAC3 791 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 C2CD4AQ8NCU7 369 aaPredicted RBP16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 OR4L1Q8NH43 312 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 GABPB2Q8TAK5 448 aaPredicted RBP16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 FAM3CQ92520 227 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 PCDH12Q9NPG4 1184 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 FKBPLQ9UIM3 349 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 PKP3Q9Y446 797 aa16.34■□□□□ 0.21
CEACAM1-202ENST00000344391 C1QTNF3-AMACRE9PGA6 284 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 CYP2A6P11509 494 aaPredicted RBP16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 NFKBIAP25963 317 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 GABRB3P28472 473 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 VIPR1P32241 457 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 SLC1A2P43004 574 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 MRPS21P82921 87 aaKnown RBP16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 PTSQ03393 145 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 ZP2Q05996 745 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 CTBP1Q13363 440 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 LRRC66Q68CR7 880 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 ZNF470Q6ECI4 717 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 SDE2Q6IQ49 451 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 AFTPHQ6ULP2 937 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 KIAA0408Q6ZU52 694 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 TAOK1Q7L7X3 1001 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 MMAAQ8IVH4 418 aaKnown RBP16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 GPR150Q8NGU9 434 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 SGSM3Q96HU1 749 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 PPP1R16AQ96I34 528 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 RBBP8Q99708 897 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 RSPH9Q9H1X1 276 aaPredicted RBP16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 FBXO5Q9UKT4 447 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 ACTL7BQ9Y614 415 aa16.33■□□□□ 0.2
CEACAM1-202ENST00000344391 A0A1W2PPM1 405 aa16.32■□□□□ 0.2
CEACAM1-202ENST00000344391 TRIM49D1C9J1S8 452 aa16.32■□□□□ 0.2
CEACAM1-202ENST00000344391 CD3EAPO15446 510 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms