RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 ABCG1P45844 678 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 VASPP50552 380 aaPredicted RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 ZNF140P52738 457 aaPredicted RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 LIMK2P53671 638 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 MPP1Q00013 466 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 MRNIPQ6NTE8 343 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 SDCCAG8Q86SQ7 713 aaPredicted RBP17.37■□□□□ 0.37
CLDN4-201ENST00000340958 CNTN4Q8IWV2 1026 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 ZFYVE1Q9HBF4 777 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 GGT7Q9UJ14 662 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 FBXO5Q9UKT4 447 aa17.37■□□□□ 0.37
CLDN4-201ENST00000340958 EDDM13A0A1B0GTR0 161 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 CCDC162PA2VCL2 907 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 OR51F1A6NGY5 319 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 WASH3PC4AMC7 463 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 COPEO14579 308 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 HLA-EP13747 358 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 NFKBIAP25963 317 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 TYK2P29597 1187 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 HNF1BP35680 557 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 SOX9P48436 509 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 DNAJC3Q13217 504 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 FASTKD1Q53R41 847 aaKnown RBP17.36■□□□□ 0.37
CLDN4-201ENST00000340958 LYSMD3Q7Z3D4 306 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 LMNTD2Q8IXW0 634 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 OR4L1Q8NH43 312 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 CHFRQ96EP1 664 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 CDKN2AIPNLQ96HQ2 116 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 OSBPL1AQ9BXW6 950 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 SLC13A1Q9BZW2 595 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 MLXIPLQ9NP71 852 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 CATSPERZQ9NTU4 200 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 PCMTD2Q9NV79 361 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 MYLKQ15746 1914 aa17.36■□□□□ 0.37
CLDN4-201ENST00000340958 CAPN8A6NHC0 703 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 ANHXE9PGG2 379 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 TPP1O14773 563 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 CD3EAPO15446 510 aaKnown RBP17.35■□□□□ 0.37
CLDN4-201ENST00000340958 ZNF234Q14588 700 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 LRRC14Q15048 493 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 FSTL4Q6MZW2 842 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 BRAT1Q6PJG6 821 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 AFTPHQ6ULP2 937 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 KIAA0408Q6ZU52 694 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 SFTPA1Q8IWL2 248 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 KDM1BQ8NB78 822 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 C2CD4AQ8NCU7 369 aaPredicted RBP17.35■□□□□ 0.37
CLDN4-201ENST00000340958 LRIG1Q96JA1 1093 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 VPS39Q96JC1 886 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 RHOJQ9H4E5 214 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 SSU72Q9NP77 194 aaKnown RBP17.35■□□□□ 0.37
CLDN4-201ENST00000340958 FBXO6Q9NRD1 293 aaPredicted RBP17.35■□□□□ 0.37
CLDN4-201ENST00000340958 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.35■□□□□ 0.37
CLDN4-201ENST00000340958 ANKRD36A6QL64 1941 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 A0A0U1RQS6 177 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 PRPF4O43172 522 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLDN4-201ENST00000340958 AHSGP02765 367 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 CD151P48509 253 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 CCT5P48643 541 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 SERPINB8P50452 374 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 ACVR1Q04771 509 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 POM121L1PQ3SYA9 428 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 TIFABQ6ZNK6 161 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 RAPH1Q70E73 1250 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 ZSWIM9Q86XI8 627 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 PHTF2Q8N3S3 785 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 DCLK2Q8N568 766 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 GPATCH11Q8N954 259 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 OR8D1Q8WZ84 308 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 P2RY13Q9BPV8 354 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 LIMD1Q9UGP4 676 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 MUTYHQ9UIF7 546 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 SLC39A10Q9ULF5 831 aa17.35■□□□□ 0.37
CLDN4-201ENST00000340958 MTO1Q9Y2Z2 717 aaKnown RBP17.35■□□□□ 0.37
CLDN4-201ENST00000340958 HMX2A2RU54 273 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 SIN3BO75182 1162 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 CLDN7O95471 211 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 RPA3P35244 121 aaPredicted RBP17.34■□□□□ 0.37
CLDN4-201ENST00000340958 HMGCLP35914 325 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 SLC12A2P55011 1212 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 HNRNPA1L2Q32P51 320 aaKnown RBP17.34■□□□□ 0.37
CLDN4-201ENST00000340958 ZRANB3Q5FWF4 1079 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 LDB1Q86U70 411 aaPredicted RBP17.34■□□□□ 0.37
CLDN4-201ENST00000340958 ZC3HC1Q86WB0 502 aaKnown RBP17.34■□□□□ 0.37
CLDN4-201ENST00000340958 CILP2Q8IUL8 1156 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 PLCD3Q8N3E9 789 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 BANPQ8N9N5 519 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 SPOCK2Q92563 424 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 ECHDC3Q96DC8 303 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 SCRN2Q96FV2 425 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 SGSM3Q96HU1 749 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 APOPT1Q96IL0 206 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 ELMO2Q96JJ3 720 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 VPS11Q9H270 941 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 FKBPLQ9UIM3 349 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 WASF2Q9Y6W5 498 aa17.34■□□□□ 0.37
CLDN4-201ENST00000340958 ARNTLO00327 626 aa17.33■□□□□ 0.37
CLDN4-201ENST00000340958 KPNA3O00505 521 aaPredicted RBP17.33■□□□□ 0.37
CLDN4-201ENST00000340958 PFDN6O15212 129 aa17.33■□□□□ 0.37
CLDN4-201ENST00000340958 RFPL1O75677 317 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms