RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PAF1Q8N7H5 531 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 P3H4Q92791 437 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 TADA1Q96BN2 335 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 HAUS1Q96CS2 278 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 COQ10AQ96MF6 247 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 HEMGNQ9BXL5 484 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 KLF15Q9UIH9 416 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 EFR3BQ9Y2G0 817 aa15.43■□□□□ 0.06
VAPA-201ENST00000340541 A0A0J9YYE9 177 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 A0A0U1RQS6 177 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 APOC4-APOC2K7ER74 178 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 TOR1BO14657 336 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 DDX3YO15523 660 aaKnown RBP15.42■□□□□ 0.06
VAPA-201ENST00000340541 PIAS2O75928 621 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 TRBC1P01850 177 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 APOC2P02655 101 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 CSF2P04141 144 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 ALPIP09923 528 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 GIMD1P0DJR0 217 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 PYGMP11217 842 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 NME1P15531 152 aaKnown RBP15.42■□□□□ 0.06
VAPA-201ENST00000340541 CTPS1P17812 591 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 DGKAP23743 735 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 PTPN3P26045 913 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 CD86P42081 329 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 RWDD2BP57060 319 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 YPEL5P62699 121 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 CCZ1BP86790 482 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 CCZ1P86791 482 aaPredicted RBP15.42■□□□□ 0.06
VAPA-201ENST00000340541 TEX44Q53QW1 395 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 ZNF542PQ5EBM4 170 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 BZW1Q7L1Q6 419 aaKnown RBP15.42■□□□□ 0.06
VAPA-201ENST00000340541 PEX26Q7Z412 305 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 TSPAN33Q86UF1 283 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 ZC3H18Q86VM9 953 aaKnown RBP15.42■□□□□ 0.06
VAPA-201ENST00000340541 PARGQ86W56 976 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 EID2Q8N6I1 236 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 PLA2G15Q8NCC3 412 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 CCDC112Q8NEF3 446 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 TFB1MQ8WVM0 346 aaKnown RBP15.42■□□□□ 0.06
VAPA-201ENST00000340541 HNRNPLLQ8WVV9 542 aaKnown RBP15.42■□□□□ 0.06
VAPA-201ENST00000340541 IMP4Q96G21 291 aaKnown RBP15.42■□□□□ 0.06
VAPA-201ENST00000340541 AGAP3Q96P47 875 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 QKIQ96PU8 341 aaKnown RBP eCLIP15.42■□□□□ 0.061e-14■■■■■ 35.1
VAPA-201ENST00000340541 OSBPL8Q9BZF1 889 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 GRPEL1Q9HAV7 217 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 HAUS2Q9NVX0 235 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 UCKL1Q9NWZ5 548 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 SEPT10Q9P0V9 454 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 AMFRQ9UKV5 643 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 PACSIN2Q9UNF0 486 aaPredicted RBP15.42■□□□□ 0.06
VAPA-201ENST00000340541 CHKBQ9Y259 395 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 LRP4O75096 1905 aa15.42■□□□□ 0.06
VAPA-201ENST00000340541 FAM149AA5PLN7 773 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 NEBLO76041 1014 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 FTCDO95954 541 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 CYP2A6P11509 494 aaPredicted RBP15.41■□□□□ 0.06
VAPA-201ENST00000340541 CKMT2P17540 419 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 CD68P34810 354 aaPredicted RBP15.41■□□□□ 0.06
VAPA-201ENST00000340541 ACADVLP49748 655 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 RPL26P61254 145 aaKnown RBP15.41■□□□□ 0.06
VAPA-201ENST00000340541 INPP5AQ14642 412 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 NOMO1Q15155 1222 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 CCDC157Q569K6 752 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 CRTC1Q6UUV9 634 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 NYAP1Q6ZVC0 841 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 USP45Q70EL2 814 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 HSD11B1LQ7Z5J1 315 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 SYCE1Q8N0S2 351 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 PELI3Q8N2H9 469 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 RNF10Q8N5U6 811 aaKnown RBP15.41■□□□□ 0.06
VAPA-201ENST00000340541 NXPE2Q96DL1 559 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 HES6Q96HZ4 224 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 TEKT5Q96M29 485 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 TRIB3Q96RU7 358 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 NRSN2Q9GZP1 204 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 SLC25A51Q9H1U9 297 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 PCDH9Q9HC56 1237 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 DNAJC28Q9NX36 388 aa15.41■□□□□ 0.06
VAPA-201ENST00000340541 RPL26L1Q9UNX3 145 aaKnown RBP15.41■□□□□ 0.06
VAPA-201ENST00000340541 CAPN8A6NHC0 703 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 MIF4GDA9UHW6 222 aaKnown RBP15.4■□□□□ 0.06
VAPA-201ENST00000340541 PSMD11O00231 422 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 TRIM38O00635 465 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 PCCBP05166 539 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 THOP1P52888 689 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 XRCC4Q13426 336 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 MTM1Q13496 603 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 RTP5Q14D33 572 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 ACOX1Q15067 660 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 SLC14A2Q15849 920 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 CDKN3Q16667 212 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 SOWAHCQ53LP3 525 aaPredicted RBP15.4■□□□□ 0.06
VAPA-201ENST00000340541 MACC1Q6ZN28 852 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 TECPR1Q7Z6L1 1165 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 MARCH9Q86YJ5 346 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 ACTL9Q8TC94 416 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 DTD2Q96FN9 168 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 LYSMD1Q96S90 227 aa15.4■□□□□ 0.06
VAPA-201ENST00000340541 RBM15Q96T37 977 aaKnown RBP eCLIP15.4■□□□□ 0.062e-8■■□□□ 14.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms