RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GOLGA8CPA6NN73 597 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 ANKRD66B4E2M5 251 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 PDE2AO00408 941 aaPredicted RBP19.2■□□□□ 0.66
SYNE4-202ENST00000340477 KCNN4O15554 427 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 ZSCAN12O43309 604 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 SDC3O75056 442 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 PMPCBO75439 489 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 CSF2P04141 144 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 NME1P15531 152 aaKnown RBP19.2■□□□□ 0.66
SYNE4-202ENST00000340477 TSHRP16473 764 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 BLKP51451 505 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 GALNT3Q14435 633 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 PRPSAP1Q14558 356 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 NFATC4Q14934 902 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 SHBQ15464 509 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 TSPAN33Q86UF1 283 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 ZNF567Q8N184 647 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 LRRC45Q96CN5 670 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 APOOQ9BUR5 198 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 SLC13A1Q9BZW2 595 aa19.2■□□□□ 0.66
SYNE4-202ENST00000340477 TDRD6O60522 2096 aaKnown RBP19.2■□□□□ 0.66
SYNE4-202ENST00000340477 COL5A1P20908 1838 aaPredicted RBP19.19■□□□□ 0.66
SYNE4-202ENST00000340477 SPAARA0A1B0GVQ0 90 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 PIAS2O75928 621 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 MT-CYBP00156 380 aaPredicted RBP19.19■□□□□ 0.66
SYNE4-202ENST00000340477 PRLP01236 227 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 PYGLP06737 847 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 JUNDP17535 347 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 ETV3P41162 512 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 BNIP3Q12983 259 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 QPCTQ16769 361 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 MEI1Q5TIA1 1274 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 ESRP1Q6NXG1 681 aaKnown RBP19.19■□□□□ 0.66
SYNE4-202ENST00000340477 CRTC1Q6UUV9 634 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 KDELC2Q7Z4H8 507 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 HSD11B1LQ7Z5J1 315 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 RAVER1Q8IY67 606 aaKnown RBP19.19■□□□□ 0.66
SYNE4-202ENST00000340477 EID2Q8N6I1 236 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 SPATA22Q8NHS9 363 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 WDR92Q96MX6 357 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 FCRL5Q96RD9 977 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 LYSMD1Q96S90 227 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 FAM118BQ9BPY3 351 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 FSD1LQ9BXM9 530 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 CARD9Q9H257 536 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 PHPT1Q9NRX4 125 aaPredicted RBP19.19■□□□□ 0.66
SYNE4-202ENST00000340477 PKD2L2Q9NZM6 624 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 KLQ9UEF7 1012 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 APOBEC3BQ9UH17 382 aaKnown RBP19.19■□□□□ 0.66
SYNE4-202ENST00000340477 APOBEC2Q9Y235 224 aaKnown RBP19.19■□□□□ 0.66
SYNE4-202ENST00000340477 BTBD3Q9Y2F9 522 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 OR1A2Q9Y585 309 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 PCNX2A6NKB5 2137 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 SPTBN2O15020 2390 aa19.19■□□□□ 0.66
SYNE4-202ENST00000340477 CBFA2T3O75081 653 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 ANXA9O76027 345 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 NDST3O95803 873 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 ADRB1P08588 477 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 MSNP26038 577 aaKnown RBP19.18■□□□□ 0.66
SYNE4-202ENST00000340477 STC1P52823 247 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 GEMP55040 296 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 KIAA1024LP59773 190 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 PPARDQ03181 441 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 MPP3Q13368 585 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 IHHQ14623 411 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 ZNF542PQ5EBM4 170 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 N4BP2L1Q5TBK1 243 aaPredicted RBP19.18■□□□□ 0.66
SYNE4-202ENST00000340477 FAXCQ5TGI0 409 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 RAET1GQ6H3X3 334 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 PNCKQ6P2M8 343 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 ENPP7Q6UWV6 458 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 BAHD1Q8TBE0 780 aaPredicted RBP19.18■□□□□ 0.66
SYNE4-202ENST00000340477 AP2M1Q96CW1 435 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 FRMD8P1Q9BZ68 369 aaPredicted RBP19.18■□□□□ 0.66
SYNE4-202ENST00000340477 GBA3Q9H227 469 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 EVA1BQ9NVM1 165 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 UBP1Q9NZI7 540 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 SPASTQ9UBP0 616 aa19.18■□□□□ 0.66
SYNE4-202ENST00000340477 F5H423 210 aaPredicted RBP19.17■□□□□ 0.66
SYNE4-202ENST00000340477 TNFSF14O43557 240 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 RASGRP1O95267 797 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 TRIM16O95361 564 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 LDOC1O95751 146 aaPredicted RBP19.17■□□□□ 0.66
SYNE4-202ENST00000340477 DGKAP23743 735 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 CD68P34810 354 aaPredicted RBP19.17■□□□□ 0.66
SYNE4-202ENST00000340477 KLF1Q13351 362 aaPredicted RBP19.17■□□□□ 0.66
SYNE4-202ENST00000340477 KDM7AQ6ZMT4 941 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 ARHGEF18Q6ZSZ5 1173 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 Q6ZVL8 140 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 ZNF765Q7L2R6 523 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 GLRX5Q86SX6 157 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 PHACTR4Q8IZ21 702 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 NRSN1Q8IZ57 195 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 PLA2G15Q8NCC3 412 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 IPMKQ8NFU5 416 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 TADA1Q96BN2 335 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 CNDP2Q96KP4 475 aaKnown RBP19.17■□□□□ 0.66
SYNE4-202ENST00000340477 SPATA13Q96N96 652 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 TRIB3Q96RU7 358 aa19.17■□□□□ 0.66
SYNE4-202ENST00000340477 DUSP23Q9BVJ7 150 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms