RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 JUPP14923 745 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 EPHB1P54762 984 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 SRP54P61011 504 aaKnown RBP13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 SLC10A2Q12908 348 aaPredicted RBP13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 TAZQ16635 292 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 C6orf132Q5T0Z8 1188 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 HES3Q5TGS1 186 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 PNCKQ6P2M8 343 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 ENPP7Q6UWV6 458 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 GKN2Q86XP6 184 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 RFX6Q8HWS3 928 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 CBARPQ8N350 705 aaPredicted RBP13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 OR56A4Q8NGH8 313 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 NAT6Q93015 286 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 DTD2Q96FN9 168 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 OLFM3Q96PB7 478 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 BOCQ9BWV1 1114 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 OR1A2Q9Y585 309 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 HEY1Q9Y5J3 304 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 ALG6Q9Y672 507 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 EPN1Q9Y6I3 576 aaPredicted RBP13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 DMXL2Q8TDJ6 3036 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 CACNA1BQ00975 2339 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 PLXNB3Q9ULL4 1909 aa13.35□□□□□ -0.27
SIRPB3P-201ENST00000340424 A0A0J9YYE9 177 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 CAPN8A6NHC0 703 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 NPIPB15A6NHN6 443 aaPredicted RBP13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 MTSS1O43312 755 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 NDUFA10O95299 355 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 MAP3K6O95382 1288 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 TNFP01375 233 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 TRBC1P01850 177 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 CAPNS1P04632 268 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 HLA-DQB2P05538 268 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 MYCLP1P12525 358 aaPredicted RBP13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 CTSEP14091 401 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 GM2AP17900 193 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 TGM2P21980 687 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 LHCGRP22888 699 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 CDKN2BP42772 138 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 SEMG2Q02383 582 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 DSC2Q02487 901 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 DPTQ07507 201 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 AP1B1Q10567 949 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 NR0B2Q15466 257 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 SLC14A2Q15849 920 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 ALG11Q2TAA5 492 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 DEFB133Q30KQ1 61 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 KDM7AQ6ZMT4 941 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 ZNF765Q7L2R6 523 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 NLRP8Q86W28 1048 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 PROSER1Q86XN7 944 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 HID1Q8IV36 788 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 KATNAL2Q8IYT4 538 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 RBFAQ8N0V3 343 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 TXLNBQ8N3L3 684 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 PLA2G15Q8NCC3 412 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 WDR48Q8TAF3 677 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 ARRDC2Q8TBH0 407 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 FUBP1Q96AE4 644 aaKnown RBP13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 NXPE2Q96DL1 559 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 RBM41Q96IZ5 413 aaKnown RBP13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 LYSMD1Q96S90 227 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 LGMNQ99538 433 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 ADGRE3Q9BY15 652 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 PHPT1Q9NRX4 125 aaPredicted RBP13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 DOLKQ9UPQ8 538 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 CLCA2Q9UQC9 943 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 TDRD6O60522 2096 aaKnown RBP13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 ZZEF1O43149 2961 aa13.34□□□□□ -0.27
SIRPB3P-201ENST00000340424 LY6G6EA0A0G2JKS1 128 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 EME2A4GXA9 379 aaPredicted RBP13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 BTNL10A8MVZ5 291 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 A8MX80 341 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 KCNK1O00180 336 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 GCATO75600 419 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 ZRANB2O95218 330 aaKnown RBP eCLIP13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 JCHAINP01591 159 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 TERF1P54274 439 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 INSM1Q01101 510 aaPredicted RBP13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 TFDP3Q5H9I0 405 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 MFSD7Q6UXD7 560 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 RCOR2Q8IZ40 523 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 NRSN1Q8IZ57 195 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 ARL10Q8N8L6 244 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 DCBLD1Q8N8Z6 715 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 OR6C4Q8NGE1 309 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 IFI44Q8TCB0 444 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 GRAMD1AQ96CP6 724 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 RBM15Q96T37 977 aaKnown RBP eCLIP13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 TEX101Q9BY14 249 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 NRSN2Q9GZP1 204 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 ABCG4Q9H172 646 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 TCEAL2Q9H3H9 227 aaPredicted RBP13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 PCDH9Q9HC56 1237 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 IMPACTQ9P2X3 320 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 PNMA8BQ9ULN7 279 aaPredicted RBP13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 U3KQA8 63 aa13.33□□□□□ -0.28
SIRPB3P-201ENST00000340424 RGSL1A5PLK6 1076 aa13.32□□□□□ -0.28
SIRPB3P-201ENST00000340424 FAM149AA5PLN7 773 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms