RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CYB5D1Q6P9G0 228 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 NCEH1Q6PIU2 408 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 GRASPQ7Z6J2 395 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ZSWIM9Q86XI8 627 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 WDR75Q8IWA0 830 aaKnown RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 LSMEM2Q8N112 164 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 CNPY4Q8N129 248 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 RYBPQ8N488 228 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 CCNYL1Q8N7R7 359 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 HJURPQ8NCD3 748 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 STYXQ8WUJ0 223 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 NUDCD1Q96RS6 583 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC30A3Q99726 388 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 MIPEPQ99797 713 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PLCD4Q9BRC7 762 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 FAM167BQ9BTA0 163 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ARHGEF3Q9NR81 526 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 SLCO3A1Q9UIG8 710 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ZDHHC2Q9UIJ5 367 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 FKBPLQ9UIM3 349 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 TRAV19A0A0A6YYK7 116 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 GOLGA8QA0A0J9YX86 632 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 UBA6A0AVT1 1052 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 GOLGA8OA6NCC3 632 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 LRRC14BA6NHZ5 514 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 IQCF5A8MTL0 148 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PRR5-ARHGAP8B1AHC4 643 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 GOLGA8NF8WBI6 632 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ZBTB14O43829 449 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 IL1BP01584 269 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ARHGAP8P85298 464 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ACVR1Q04771 509 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 MESP2Q0VG99 397 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PPIGQ13427 754 aaKnown RBP eCLIP7.41□□□□□ -1.225e-7■□□□□ 8.2
SRFBP1-201ENST00000339397 PEX6Q13608 980 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC9B1Q4ZJI4 515 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ADGRD2Q7Z7M1 963 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 BBS5Q8N3I7 341 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 GBP7Q8N8V2 638 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 SORCS1Q8WY21 1168 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 PTERQ96BW5 349 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 UBXN10Q96LJ8 280 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ALG9Q9H6U8 611 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 WDR55Q9H6Y2 383 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 COG4Q9H9E3 785 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 KLC4Q9NSK0 619 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 POLR3BQ9NW08 1133 aaPredicted RBP7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 NSMCE4AQ9NXX6 385 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 KCNK4Q9NYG8 393 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 IKZF3Q9UKT9 509 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 ASB3Q9Y575 518 aa7.41□□□□□ -1.22
SRFBP1-201ENST00000339397 DENND4CQ5VZ89 1909 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 ALPK3Q96L96 1907 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 ANTXRLA6NF34 631 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 NEDD8-MDP1E9PL57 170 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 H3BMM5 538 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 PPP6CO00743 305 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 DIAPH2O60879 1101 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 RPP40O75818 363 aaKnown RBP7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 ENO1P06733 434 aaKnown RBP7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 CA3P07451 260 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 IDH3AP50213 366 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC12A2P55011 1212 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 POU4F1Q01851 419 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 KDSRQ06136 332 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 MTA1Q13330 715 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 RCN2Q14257 317 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 RINLQ6ZS11 566 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 LYSMD3Q7Z3D4 306 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 TRIM42Q8IWZ5 723 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 FAM217AQ8IXS0 508 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 ZNF398Q8TD17 642 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 PPP4R1Q8TF05 950 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 EXT2Q93063 718 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 PTCD3Q96EY7 689 aaKnown RBP7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 TBC1D10AQ9BXI6 508 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 ABCG8Q9H221 673 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 MTG2Q9H4K7 406 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 CATSPERZQ9NTU4 200 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 TSR3Q9UJK0 312 aaKnown RBP7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 FIS1Q9Y3D6 152 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 IRAK3Q9Y616 596 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 SPEGQ15772 3267 aa7.4□□□□□ -1.22
SRFBP1-201ENST00000339397 HSPA4LO95757 839 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 PMLP29590 882 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 PBX2P40425 430 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 HADHAP40939 763 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 ERFP50548 548 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 RFTN1Q14699 578 aaPredicted RBP7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 PLEKHG6Q3KR16 790 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 TMEM215Q68D42 235 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 TRIM68Q6AZZ1 485 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 ZYG11AQ6WRX3 759 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 RFLNAQ6ZTI6 216 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 KIAA0408Q6ZU52 694 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 CCDC149Q6ZUS6 474 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 ISCA2Q86U28 154 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 TSPAN33Q86UF1 283 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 POU5F2Q8N7G0 328 aa7.4□□□□□ -1.23
SRFBP1-201ENST00000339397 CALML6Q8TD86 181 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms