RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 ZBTB48P10074 688 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 IL1R1P14778 569 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF26P17031 533 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 ALOX12P18054 663 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 PDHA2P29803 388 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 IL15P40933 162 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 SLC15A1P46059 708 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 GZMKP49863 264 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 HSPA2P54652 639 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 ACY1Q03154 408 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 FADDQ13158 208 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 GRIK4Q16099 956 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TCTE1Q5JU00 501 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 POTEGQ6S5H5 508 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TPGS1Q6ZTW0 290 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CAMKVQ8NCB2 501 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 OR6F1Q8NGZ6 308 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 ADAM32Q8TC27 787 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 LPGAT1Q92604 370 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 PPP1R2P1Q96PQ5 205 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 MCCC2Q9HCC0 563 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TAS2R9Q9NYW1 312 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 ARMCX1Q9P291 453 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 RPS6KA6Q9UK32 745 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 FBXO5Q9UKT4 447 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 STUB1Q9UNE7 303 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 COG5Q9UP83 839 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 RGSL1A5PLK6 1076 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CTDSP2O14595 271 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 SLC30A4O14863 429 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CPNE3O75131 537 aaKnown RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 UGT2B11O75310 529 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 STX11O75558 287 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 PPM1BO75688 479 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 ANGPTL1O95841 491 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CYP3A4P08684 503 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 UMPSP11172 480 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 HOXA6P31267 233 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 EIF2S3P41091 472 aaKnown RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 C21orf58P58505 322 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CDKL1Q00532 357 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 PUM1Q14671 1186 aaKnown RBP eCLIP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 LTB4RQ15722 352 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 EIF2S3LQ2VIR3 472 aaKnown RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 GPATCH4Q5T3I0 446 aaKnown RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 HACD2Q6Y1H2 254 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 KRT25Q7Z3Z0 450 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 PCDH20Q8N6Y1 951 aaKnown RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 LRRC17Q8N6Y2 441 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TTLL6Q8N841 843 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 ZNF781Q8N8C0 355 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 IL17RDQ8NFM7 739 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CYGBQ8WWM9 190 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 SLC45A3Q96JT2 553 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 RNF145Q96MT1 663 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CDADC1Q9BWV3 514 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 REXO4Q9GZR2 422 aaKnown RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 COQ10BQ9H8M1 238 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 LGR6Q9HBX8 967 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TNPO3Q9Y5L0 923 aaKnown RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 ALG6Q9Y672 507 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 AUP1Q9Y679 476 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 UGGT1Q9NYU2 1555 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 RIC1Q4ADV7 1423 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 GLRA3O75311 464 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 PMPCBO75439 489 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 WDR47O94967 919 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TCF4P15884 667 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 SPCS3P61009 180 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 PTP4A2Q12974 167 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TNK1Q13470 666 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 HNF4GQ14541 408 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 DCAF17Q5H9S7 520 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 LIN9Q5TKA1 542 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 SWSAP1Q6NVH7 229 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 FUT10Q6P4F1 479 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 OVCH2Q7RTZ1 564 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 OR13J1Q8NGT2 312 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 SSX3Q99909 188 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 COPZ2Q9P299 210 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 IFT80Q9P2H3 777 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 MORF4L1Q9UBU8 362 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 DRG1Q9Y295 367 aaKnown RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TMX2Q9Y320 296 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TCAF1Q9Y4C2 921 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 PCDHA3Q9Y5H8 950 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 C1orf167Q5SNV9 1468 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 hCG_1807616A0A1W2PRN6 198 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 RAB19A4D1S5 217 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 SLC9B1P1A6NJY1 282 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CLDN24A6NM45 220 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 IPO13O94829 963 aaKnown RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 CD6P30203 668 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 MCAMP43121 646 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 PPP3CCP48454 512 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 TOB1P50616 345 aaPredicted RBP4.16□□□□□ -1.74
NEDD4-201ENST00000338963 SNAP25P60880 206 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 AANATQ16613 207 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 DESI1Q6ICB0 168 aa4.16□□□□□ -1.74
NEDD4-201ENST00000338963 EFL1Q7Z2Z2 1120 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms