RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 SGIP1Q9BQI5 828 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 YIPF1Q9Y548 306 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 VPS4BO75351 444 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 IRF8Q02556 426 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 FBXO48Q5FWF7 155 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ZFP1Q6P2D0 407 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PRMT9Q6P2P2 845 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 C3orf58Q8NDZ4 430 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 GDPD5Q8WTR4 605 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 LINGO1Q96FE5 620 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 C1orf74Q96LT6 269 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 HAS3O00219 553 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 QSOX1O00391 747 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SLC9A3R1O14745 358 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 CDHR3Q6ZTQ4 885 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SYTL1Q8IYJ3 562 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PGBD3Q8N328 593 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 CYGBQ8WWM9 190 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PDP2Q9P2J9 529 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 GNPTGQ9UJJ9 305 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SCN4AP35499 1836 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 OR51F1A6NGY5 319 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 RFPL1O75677 317 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 GNRH1P01148 92 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ALBP02768 609 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ATP6V1B1P15313 513 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SWT1Q5T5J6 900 aaKnown RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 FBXL19Q6PCT2 694 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 DENND1AQ8TEH3 1009 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SH3GL1Q99961 368 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 OXSMQ9NWU1 459 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 NMRK1Q9NWW6 199 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PNMA8BQ9ULN7 279 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 CHRNA1P02708 482 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PTDSS1P48651 473 aaKnown RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 STARD3Q14849 445 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 TIFABQ6ZNK6 161 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 KCNN1Q92952 543 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 RNF145Q96MT1 663 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 DNAJC28Q9NX36 388 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 COL22A1Q8NFW1 1626 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 MGAT4DA6NG13 374 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ENPP3O14638 875 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 DCLK1O15075 740 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 FAM189A1O60320 539 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 EFCAB14O75071 495 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SLC25A14O95258 325 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 CDH2P19022 906 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SOAT1P35610 550 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 IDH3AP50213 366 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PLOD1Q02809 727 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 CREMQ03060 361 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 TNIP2Q8NFZ5 429 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 MTFMTQ96DP5 389 aaKnown RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PGAP3Q96FM1 320 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF599Q96NL3 588 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 TCF12Q99081 682 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 STX18Q9P2W9 335 aaKnown RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 TIMM22Q9Y584 194 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 AP4S1Q9Y587 144 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 HLA-DQB2P05538 268 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 RAP1GDS1P52306 607 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 IRF9Q00978 393 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 PRKG2Q13237 762 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 DNAJB7Q7Z6W7 309 aaPredicted RBP6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SELENOMQ8WWX9 145 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 CDKN2AIPNLQ96HQ2 116 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 GPR21Q99679 349 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SPAG4Q9NPE6 437 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 SCML2Q9UQR0 700 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 TLL2Q9Y6L7 1015 aa6.3□□□□□ -1.4
PRKDC-202ENST00000338368 C16orf96A6NNT2 1141 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 EPB42P16452 691 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CTNNB1P35222 781 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 NAA20P61599 178 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 RNF217Q8TC41 542 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 AUTS2Q8WXX7 1259 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF184Q99676 751 aaPredicted RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 NMUR1Q9HB89 426 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 FCF1Q9Y324 198 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ACOX1Q15067 660 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 MPPE1Q53F39 396 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 DLG3Q92796 817 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 MYO19Q96H55 970 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 GPR62Q9BZJ7 368 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 MYO1GB0I1T2 1018 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 RNASEH1O60930 286 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 MRPL10Q7Z7H8 261 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 TAGAPQ8N103 731 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 TTC30BQ8N4P2 665 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 GRIN3AQ8TCU5 1115 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ESAMQ96AP7 390 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 RTKNQ9BST9 563 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 GEMIN8Q9NWZ8 242 aaKnown RBP6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ITGB1BP2Q9UKP3 347 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 LINC00032P0C843 101 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CYBAP13498 195 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 ATP6V1B2P21281 511 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 RANBP1P43487 201 aa6.29□□□□□ -1.4
PRKDC-202ENST00000338368 CST9Q5W186 159 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms