RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 KDM1BQ8NB78 822 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 ALKBH8Q96BT7 664 aaKnown RBP14.71□□□□□ -0.06
CBX3-201ENST00000337620 EID2BQ96D98 161 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 SCRN2Q96FV2 425 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 VPS39Q96JC1 886 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 SRPK1Q96SB4 655 aaKnown RBP14.71□□□□□ -0.06
CBX3-201ENST00000337620 SLC13A1Q9BZW2 595 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 KCNK12Q9HB15 430 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 INTS9Q9NV88 658 aaKnown RBP14.71□□□□□ -0.06
CBX3-201ENST00000337620 MARCH4Q9P2E8 410 aaPredicted RBP14.71□□□□□ -0.06
CBX3-201ENST00000337620 FKBPLQ9UIM3 349 aa14.71□□□□□ -0.06
CBX3-201ENST00000337620 A0A1W2PQ67 120 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 NPIPB15A6NHN6 443 aaPredicted RBP14.7□□□□□ -0.06
CBX3-201ENST00000337620 TPP1O14773 563 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 PRPF4O43172 522 aaKnown RBP eCLIP14.7□□□□□ -0.06
CBX3-201ENST00000337620 TYROBPO43914 113 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 HAUS5O94927 633 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 ALDOAP04075 364 aaKnown RBP14.7□□□□□ -0.06
CBX3-201ENST00000337620 SAT1P21673 171 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 RPA3P35244 121 aaPredicted RBP14.7□□□□□ -0.06
CBX3-201ENST00000337620 HMGCLP35914 325 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 HADHAP40939 763 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 IL12RB1P42701 662 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 GNGT1P63211 74 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 DNAJC3Q13217 504 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 C9orf64Q5T6V5 341 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 EGFLAMQ63HQ2 1017 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 MRNIPQ6NTE8 343 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 TIFABQ6ZNK6 161 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 KIAA0408Q6ZU52 694 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 SH2D5Q6ZV89 423 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 CILP2Q8IUL8 1156 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 BANPQ8N9N5 519 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 ERLEC1Q96DZ1 483 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 ACOX2Q99424 681 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 P2RY13Q9BPV8 354 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 OSBPL1AQ9BXW6 950 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 TMEM245Q9H330 911 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 RHOJQ9H4E5 214 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 CATSPERZQ9NTU4 200 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 PCMTD2Q9NV79 361 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 IL17CQ9P0M4 197 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 THAP10Q9P2Z0 257 aaPredicted RBP14.7□□□□□ -0.06
CBX3-201ENST00000337620 TICRRQ7Z2Z1 1910 aa14.7□□□□□ -0.06
CBX3-201ENST00000337620 FOSL2P15408 326 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 TYK2P29597 1187 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 CD151P48509 253 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 SLC18A2Q05940 514 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 FASTKD1Q53R41 847 aaKnown RBP14.69□□□□□ -0.06
CBX3-201ENST00000337620 BRAT1Q6PJG6 821 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 AFTPHQ6ULP2 937 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 CRTC1Q6UUV9 634 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 TPRG1Q6ZUI0 275 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 TSPAN33Q86UF1 283 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 TAX1BP1Q86VP1 789 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 LMNTD2Q8IXW0 634 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 HLA-CQ95604 372 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 LRIG1Q96JA1 1093 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 PAIP2Q9BPZ3 127 aaKnown RBP14.69□□□□□ -0.06
CBX3-201ENST00000337620 MCMBPQ9BTE3 642 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 CAB39LQ9H9S4 337 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 SSU72Q9NP77 194 aaKnown RBP14.69□□□□□ -0.06
CBX3-201ENST00000337620 CACNA2D2Q9NY47 1150 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 HCN2Q9UL51 889 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 SLC39A10Q9ULF5 831 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 PPIL1Q9Y3C6 166 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 KPNA3O00505 521 aaPredicted RBP14.69□□□□□ -0.06
CBX3-201ENST00000337620 COPEO14579 308 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 EPHX1P07099 455 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 PRSS56P0CW18 603 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 MC4RP32245 332 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 SEPT7Q16181 437 aaKnown RBP14.69□□□□□ -0.06
CBX3-201ENST00000337620 CDKN3Q16667 212 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 ZNF805Q5CZA5 627 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 ZNF789Q5FWF6 425 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 CNSTQ6PJW8 725 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 CMC1Q7Z7K0 106 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 SDCCAG8Q86SQ7 713 aaPredicted RBP14.69□□□□□ -0.06
CBX3-201ENST00000337620 TTC7BQ86TV6 843 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 SLC44A3Q8N4M1 653 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 ACVR1CQ8NER5 493 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 DYDC1Q8WWB3 177 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 OR8D1Q8WZ84 308 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 SPOCK2Q92563 424 aa14.69□□□□□ -0.06
CBX3-201ENST00000337620 PHF7Q9BWX1 381 aaPredicted RBP14.69□□□□□ -0.06
CBX3-201ENST00000337620 GOLGA8CPA6NN73 597 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 SPECC1L-ADORA2AF8WAN1 911 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 PRNPP04156 253 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 XPAP23025 273 aaPredicted RBP14.68□□□□□ -0.06
CBX3-201ENST00000337620 PSMA3P25788 255 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 PMLP29590 882 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 WASP42768 502 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 LEPRP48357 1165 aaKnown RBP14.68□□□□□ -0.06
CBX3-201ENST00000337620 SERPINB8P50452 374 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 SEC13P55735 322 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 ZRANB3Q5FWF4 1079 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 PRPF38BQ5VTL8 546 aaKnown RBP14.68□□□□□ -0.06
CBX3-201ENST00000337620 LRRC66Q68CR7 880 aa14.68□□□□□ -0.06
CBX3-201ENST00000337620 TXNDC11Q6PKC3 985 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms