RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 CCNCP24863 283 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 MAN1A1P33908 653 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 GBE1Q04446 702 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 ITKQ08881 620 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 SLC10A2Q12908 348 aaPredicted RBP11.23□□□□□ -0.61
C9orf85-201ENST00000334731 MESDQ14696 234 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 TCEA2Q15560 299 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 IFI16Q16666 785 aaKnown RBP11.23□□□□□ -0.61
C9orf85-201ENST00000334731 ARMC12Q5T9G4 340 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 ALG1LQ6GMV1 187 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 ESRP1Q6NXG1 681 aaKnown RBP11.23□□□□□ -0.61
C9orf85-201ENST00000334731 PNCKQ6P2M8 343 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 THSD4Q6ZMP0 1018 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 HSD11B1LQ7Z5J1 315 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 OR56A4Q8NGH8 313 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 TPCN2Q8NHX9 752 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 LRRN4Q8WUT4 740 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 SCG3Q8WXD2 468 aaKnown RBP11.23□□□□□ -0.61
C9orf85-201ENST00000334731 OR1E3Q8WZA6 343 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 RAPGEF5Q92565 580 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 ANP32BQ92688 251 aaKnown RBP11.23□□□□□ -0.61
C9orf85-201ENST00000334731 FATE1Q969F0 183 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 PDXPQ96GD0 296 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 CCDC42Q96M95 316 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 RNF157Q96PX1 679 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 DEPDC7Q96QD5 511 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 MCCC1Q96RQ3 725 aaPredicted RBP11.23□□□□□ -0.61
C9orf85-201ENST00000334731 RBM15Q96T37 977 aaKnown RBP eCLIP11.23□□□□□ -0.61
C9orf85-201ENST00000334731 SEMA3CQ99985 751 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 LGR4Q9BXB1 951 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 FGF22Q9HCT0 170 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 RRAGDQ9NQL2 400 aaPredicted RBP11.23□□□□□ -0.61
C9orf85-201ENST00000334731 SPTLC3Q9NUV7 552 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 RBM22Q9NW64 420 aaKnown RBP eCLIP11.23□□□□□ -0.61
C9orf85-201ENST00000334731 GULP1Q9UBP9 304 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 PADI4Q9UM07 663 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 DOLKQ9UPQ8 538 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 PPIL1Q9Y3C6 166 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 ITPR1Q14643 2758 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 ACACAQ13085 2346 aa11.23□□□□□ -0.61
C9orf85-201ENST00000334731 NPIPB15A6NHN6 443 aaPredicted RBP11.22□□□□□ -0.61
C9orf85-201ENST00000334731 CASC3O15234 703 aaKnown RBP11.22□□□□□ -0.61
C9orf85-201ENST00000334731 BRINP1O60477 761 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 USP12O75317 370 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 TPM1P09493 284 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 CYP2A6P11509 494 aaPredicted RBP11.22□□□□□ -0.61
C9orf85-201ENST00000334731 CCNB1P14635 433 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 CTPS1P17812 591 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 CES1P23141 567 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 KDELR1P24390 212 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 NFKBIAP25963 317 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 EIF2S3P41091 472 aaKnown RBP11.22□□□□□ -0.61
C9orf85-201ENST00000334731 ETV3P41162 512 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 ARHGAP25P42331 645 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 ISXQ2M1V0 245 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 DENND2CQ68D51 928 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 TIGD7Q6NT04 549 aaPredicted RBP11.22□□□□□ -0.61
C9orf85-201ENST00000334731 CRTC1Q6UUV9 634 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 TSPAN33Q86UF1 283 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 GKN2Q86XP6 184 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 KYQ8NBH2 561 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 ARRDC2Q8TBH0 407 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 FGF11Q92914 225 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 NAT6Q93015 286 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 SMIM14Q96QK8 99 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 TEX101Q9BY14 249 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 POLR1EQ9GZS1 481 aaKnown RBP11.22□□□□□ -0.61
C9orf85-201ENST00000334731 WDR26Q9H7D7 661 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 MRPL40Q9NQ50 206 aaKnown RBP11.22□□□□□ -0.61
C9orf85-201ENST00000334731 KCTD5Q9NXV2 234 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 CELSR3Q9NYQ7 3312 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 DTLQ9NZJ0 730 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 SIRPGQ9P1W8 387 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 AMACRQ9UHK6 382 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 GPR34Q9UPC5 381 aa11.22□□□□□ -0.61
C9orf85-201ENST00000334731 A0A0U1RQS6 177 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 GOLGA6L3A6NEY3 463 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 C3orf70A6NLC5 250 aaPredicted RBP11.21□□□□□ -0.61
C9orf85-201ENST00000334731 PSMD11O00231 422 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 PDE2AO00408 941 aaPredicted RBP11.21□□□□□ -0.61
C9orf85-201ENST00000334731 MTA2O94776 668 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 FUCA1P04066 466 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 MPOP05164 745 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 MX2P20592 715 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 KELP23276 732 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 ACTN2P35609 894 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 LSSP48449 732 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 DSC2Q02487 901 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 NIPAL4Q0D2K0 466 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 TBX2Q13207 712 aaPredicted RBP11.21□□□□□ -0.61
C9orf85-201ENST00000334731 ARHGEF7Q14155 803 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 TBC1D25Q3MII6 688 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 ZFYVE27Q5T4F4 411 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 OGFOD3Q6PK18 319 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 RBM44Q6ZP01 1051 aaKnown RBP11.21□□□□□ -0.61
C9orf85-201ENST00000334731 RFLNAQ6ZTI6 216 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 Q6ZVL8 140 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 USP45Q70EL2 814 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 TECPR1Q7Z6L1 1165 aa11.21□□□□□ -0.61
C9orf85-201ENST00000334731 PDZD3Q86UT5 571 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms