RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 STXBP5Q5T5C0 1151 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 OVOS1Q6IE37 1185 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 AQP12AQ8IXF9 295 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 NATD1Q8N6N6 113 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 DNAJB3Q8WWF6 145 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 TMEM176AQ96HP8 235 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 RNF38Q9H0F5 515 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 DNAJC18Q9H819 358 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CALML5Q9NZT1 146 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 RPL36Q9Y3U8 105 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SALL1Q9NSC2 1324 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ENTPD3O75355 529 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 AVILO75366 819 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SLC2A2P11168 524 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 PTPN1P18031 435 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 HOXD10P28358 340 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 SLC25A3Q00325 362 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ABRQ12979 859 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 PABPC1LQ4VXU2 614 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 FAM76BQ5HYJ3 339 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF767PQ75MW2 155 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GLT6D1Q7Z4J2 308 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CPNE9Q8IYJ1 553 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 DAW1Q8N136 415 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 TRPM4Q8TD43 1214 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 KAT2AQ92830 837 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 EIF2B3Q9NR50 452 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 TLR8Q9NR97 1041 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CUEDC1Q9NWM3 386 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 UXTQ9UBK9 157 aaPredicted RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 DPP7Q9UHL4 492 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 GSTT2P0CG29 244 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CYP11B2P19099 503 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ACOX1Q15067 660 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 CPSF7Q8N684 471 aaKnown RBP5.53□□□□□ -1.52
PTPRB-202ENST00000334414 ZNF570Q96NI8 536 aa5.53□□□□□ -1.52
PTPRB-202ENST00000334414 DLGAP1O14490 977 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 RGL2O15211 777 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PSIP1O75475 530 aaKnown RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 GSTM3P21266 225 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 SLC15A1P46059 708 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 ZNF143P52747 638 aaPredicted RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 SLC5A3P53794 718 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PTPN11Q06124 597 aaPredicted RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 TMEM119Q4V9L6 283 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 RETSATQ6NUM9 610 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 VN1R5Q7Z5H4 357 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 SATL1Q86VE3 508 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 JAZF1Q86VZ6 243 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PSTKQ8IV42 348 aaKnown RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 FAM20CQ8IXL6 584 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PLEKHO2Q8TD55 490 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 NSUN4Q96CB9 384 aaKnown RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 FAM84AQ96KN4 292 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 KLHL5Q96PQ7 755 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 ITPAQ9BY32 194 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 POLR1EQ9GZS1 481 aaKnown RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 IFT46Q9NQC8 304 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 KCNH7Q9NS40 1196 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 GRID2O43424 1007 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 FDPSP14324 419 aaKnown RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 S100PP25815 95 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 SOX11P35716 441 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 ARCN1P48444 511 aaKnown RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 POLR2JP52435 117 aaKnown RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 SLC6A3Q01959 620 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 ELAVL2Q12926 359 aaKnown RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 SERPINA13PQ6UXR4 307 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 LAPTM4BQ86VI4 370 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 C4orf19Q8IY42 314 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 MIPEPQ99797 713 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PLEKHA6Q9Y2H5 1048 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PPP2R3BQ9Y5P8 575 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 ADAMTS13Q76LX8 1427 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 E2F8A0AVK6 867 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 ALOX15BO15296 676 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PMPCBO75439 489 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 CSPG5O95196 566 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 SGPL1O95470 568 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 IGSF6O95976 241 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 MAGEA12P43365 314 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 CTBP2P56545 445 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 GATAD2AQ86YP4 633 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 COLGALT2Q8IYK4 626 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 THAP6Q8TBB0 222 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 ELMO1Q92556 727 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 MED8Q96G25 268 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 KCTD7Q96MP8 289 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 LGR4Q9BXB1 951 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 CYP4F12Q9HCS2 524 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 NUDT4Q9NZJ9 180 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 FBXO9Q9UK97 447 aaPredicted RBP5.52□□□□□ -1.53
PTPRB-202ENST00000334414 LYVE1Q9Y5Y7 322 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PTPRJQ12913 1337 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PPLO60437 1756 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 LRRC14BA6NHZ5 514 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 DNAJB6O75190 326 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 PSKH1P11801 424 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 C16orf46Q6P387 395 aa5.52□□□□□ -1.53
PTPRB-202ENST00000334414 KCTD8Q6ZWB6 473 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms