RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 AGAP2Q99490 1192 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 HDAC8Q9BY41 377 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 POLMQ9NP87 494 aaPredicted RBP16.53■□□□□ 0.24
SHOX-201ENST00000334060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.53■□□□□ 0.24
SHOX-201ENST00000334060 USP36Q9P275 1121 aaKnown RBP16.53■□□□□ 0.24
SHOX-201ENST00000334060 MBD1Q9UIS9 605 aaPredicted RBP16.53■□□□□ 0.24
SHOX-201ENST00000334060 GAPDHSO14556 408 aaPredicted RBP16.52■□□□□ 0.24
SHOX-201ENST00000334060 FNTBP49356 437 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 LIG3P49916 1009 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 ZNF140P52738 457 aaPredicted RBP16.52■□□□□ 0.24
SHOX-201ENST00000334060 ARL4CP56559 192 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 CDK16Q00536 496 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 ALS2CLQ60I27 953 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 LIPIQ6XZB0 460 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 UNC5AQ6ZN44 842 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 Q6ZVL8 140 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 LINC00523Q86TU6 105 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 ABCA7Q8IZY2 2146 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 GPR26Q8NDV2 337 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 OR4K2Q8NGD2 314 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 AENQ8WTP8 325 aaKnown RBP16.52■□□□□ 0.24
SHOX-201ENST00000334060 SPOCK2Q92563 424 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 FAM131CQ96AQ9 280 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 TXLNGYQ9BZA5 131 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 CDC42EP4Q9H3Q1 356 aaKnown RBP16.52■□□□□ 0.24
SHOX-201ENST00000334060 C6orf106Q9H6K1 298 aaPredicted RBP16.52■□□□□ 0.24
SHOX-201ENST00000334060 DYRK4Q9NR20 520 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 NINJ2Q9NZG7 142 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 FKBPLQ9UIM3 349 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 TCAF1Q9Y4C2 921 aa16.52■□□□□ 0.24
SHOX-201ENST00000334060 ARIH1Q9Y4X5 557 aaPredicted RBP16.52■□□□□ 0.24
SHOX-201ENST00000334060 GOLGA6CA6NDK9 693 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 GOLGA6BA6NDN3 693 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 IGLON5A6NGN9 336 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 K7ESM1 405 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 TNFRSF10AO00220 468 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 ZNF189O75820 626 aaPredicted RBP16.51■□□□□ 0.23
SHOX-201ENST00000334060 GOLGA6DP0CG33 693 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 TNFRSF8P28908 595 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 UAP1Q16222 522 aaPredicted RBP16.51■□□□□ 0.23
SHOX-201ENST00000334060 ZSCAN26Q16670 478 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 DPPA4Q7L190 304 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 TMC3Q7Z5M5 1100 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 LDB1Q86U70 411 aaPredicted RBP16.51■□□□□ 0.23
SHOX-201ENST00000334060 PDIK1LQ8N165 341 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 FAM96AQ9H5X1 160 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 XAB2Q9HCS7 855 aaKnown RBP16.51■□□□□ 0.23
SHOX-201ENST00000334060 ITM2CQ9NQX7 267 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 SMYD2Q9NRG4 433 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 HAUS2Q9NVX0 235 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 GOLGA6AQ9NYA3 693 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 SPEGQ15772 3267 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 IGHV1OR15-9A0A0B4J2B8 117 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 ZCWPW2A0A1B0GU75 182 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 MROH6A6NGR9 719 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 RAD51BO15315 384 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 PSMD3O43242 534 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 PLRG1O43660 514 aaKnown RBP16.51■□□□□ 0.23
SHOX-201ENST00000334060 ATG13O75143 517 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 ACADMP11310 421 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 C6P13671 934 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 BPIP17213 487 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 XPAP23025 273 aaPredicted RBP16.51■□□□□ 0.23
SHOX-201ENST00000334060 VIPR1P32241 457 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 MAGEA4P43358 317 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 GRM3Q14832 879 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 MAP7D1Q3KQU3 841 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 FAM46CQ5VWP2 391 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 USP45Q70EL2 814 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 BBOF1Q8ND07 529 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 ZNF669Q96BR6 464 aaPredicted RBP16.51■□□□□ 0.23
SHOX-201ENST00000334060 TOE1Q96GM8 510 aaKnown RBP16.51■□□□□ 0.23
SHOX-201ENST00000334060 PPP1R16AQ96I34 528 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 TBATAQ96M53 351 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 EBNA1BP2Q99848 306 aaKnown RBP16.51■□□□□ 0.23
SHOX-201ENST00000334060 GPR63Q9BZJ6 419 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 ZFYVE1Q9HBF4 777 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 ARFGAP3Q9NP61 516 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 BFARQ9NZS9 450 aa16.51■□□□□ 0.23
SHOX-201ENST00000334060 SDR42E2A6NKP2 422 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 WNT9AO14904 365 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 PCDH8O95206 1070 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 ACSL3O95573 720 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 APBB3O95704 486 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 MLNP12872 115 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 CLCN5P51795 746 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 SEMA3AQ14563 771 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 FBXL6Q8N531 539 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 PLA2G15Q8NCC3 412 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 BRSK1Q8TDC3 778 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 STAMBPL1Q96FJ0 436 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 LYSMD1Q96S90 227 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 MAGEE1Q9HCI5 957 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 TREX1Q9NSU2 369 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 IL17CQ9P0M4 197 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 RPS6KL1Q9Y6S9 549 aa16.5■□□□□ 0.23
SHOX-201ENST00000334060 NEMP1O14524 444 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 UGT1A9O60656 530 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 C7P10643 843 aa16.49■□□□□ 0.23
SHOX-201ENST00000334060 CA4P22748 312 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms