RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 PRAMEF1O95521 474 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 GNAO1P09471 354 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 SV2CQ496J9 727 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 TRIM43Q96BQ3 446 aaPredicted RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 GAL3ST1Q99999 423 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 NMRAL1Q9HBL8 299 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 GJB4Q9NTQ9 266 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 NKIRAS2Q9NYR9 191 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 B3GNT3Q9Y2A9 372 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 LDOC1O95751 146 aaPredicted RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 RPL9P32969 192 aaKnown RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 PIK3R6Q5UE93 754 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC22A16Q86VW1 577 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 FOXP4Q8IVH2 680 aaPredicted RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 CFAP206Q8IYR0 622 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 UBA3Q8TBC4 463 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 TLCD1Q96CP7 247 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 RAP2CQ9Y3L5 183 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 ADAMTS12P58397 1594 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 SNRNP200O75643 2136 aaKnown RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 EME2A4GXA9 379 aaPredicted RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 USP17L5A8MUK1 530 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 MAP3K6O95382 1288 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 IL4RP24394 825 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 SRSF11Q05519 484 aaKnown RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 SNRNP35Q16560 246 aaKnown RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 GALNT7Q86SF2 657 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 GLP2RO95838 553 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 CYP4B1P13584 511 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 ECHS1P30084 290 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 DNAJA1P31689 397 aaKnown RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 PKNOX1P55347 436 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 UBAP2LQ14157 1087 aaKnown RBP10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 GPRC6AQ5T6X5 926 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 PPP1R13LQ8WUF5 828 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC39A1Q9NY26 324 aa10.35□□□□□ -0.75
SPTBN1-201ENST00000333896 CDK18Q07002 472 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 C1QBPQ07021 282 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 MADCAM1Q13477 382 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 FAM91A1Q658Y4 838 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 OR5T2Q8NGG2 359 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF347Q96SE7 839 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF471Q9BX82 626 aaPredicted RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 OR2AT4A6NND4 320 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF99A8MXY4 864 aaPredicted RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ZNF208O43345 1280 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 SPARCP09486 303 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ITGB6P18564 788 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 HTR2BP41595 481 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 RPS9P46781 194 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 GABRB2P47870 512 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 RASGEF1AQ8N9B8 481 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 TRMOQ9BU70 441 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 MID1IP1Q9NPA3 183 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ENTPD4Q9Y227 616 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 FAM237BA0A1B0GVD1 139 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 PPEF2O14830 753 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 CCNDBP1O95273 360 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ANGPTL1O95841 491 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 PVALBP20472 110 aaPredicted RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 REPS1Q96D71 796 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 MTMR8Q96EF0 704 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ABCB9Q9NP78 766 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 IFT46Q9NQC8 304 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 FBXO6Q9NRD1 293 aaPredicted RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 MEMO1Q9Y316 297 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 PRKCEQ02156 737 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 CXorf57Q6NSI4 855 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 DGLUCYQ7Z3D6 616 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 RD3Q7Z3Z2 195 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 TRABD2AQ86V40 505 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ECHDC2Q86YB7 292 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 ZC3H7AQ8IWR0 971 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 SPARTQ8N0X7 666 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 PHF10Q8WUB8 498 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 DBNDD1Q9H9R9 158 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 TBC1D13Q9NVG8 400 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 AVILO75366 819 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 GSTT2P0CG29 244 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 DUPD1Q68J44 220 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 KATNAL2Q8IYT4 538 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 RNF149Q8NC42 400 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 SLC20A1Q8WUM9 679 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 MRPL57Q9BQC6 102 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 POLRMTO00411 1230 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 GCP02774 474 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 RBP5P82980 135 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 PUS10Q3MIT2 529 aaKnown RBP10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 GPAT3Q53EU6 434 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 HES5Q5TA89 166 aa10.34□□□□□ -0.75
SPTBN1-201ENST00000333896 WDR59Q6PJI9 974 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms