RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 ZBTB49Q6ZSB9 765 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 SCD5Q86SK9 330 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 CARM1Q86X55 608 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 SPPL2CQ8IUH8 684 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 CILP2Q8IUL8 1156 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 FAM47BQ8NA70 645 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 EML4Q9HC35 981 aaKnown RBP12.34□□□□□ -0.43
VPS33B-201ENST00000333371 PLK2Q9NYY3 685 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 BTRCQ9Y297 605 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 CA12O43570 354 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 SEC24DO94855 1032 aaPredicted RBP12.34□□□□□ -0.43
VPS33B-201ENST00000333371 PEX11BO96011 259 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 CES1P23141 567 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 PCSK1P29120 753 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 SLC7A1P30825 629 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 CCR1P32246 355 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 LEPRP48357 1165 aaKnown RBP12.34□□□□□ -0.43
VPS33B-201ENST00000333371 SERPINH1P50454 418 aaKnown RBP12.34□□□□□ -0.43
VPS33B-201ENST00000333371 ECT2LQ008S8 904 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 PRKCQQ04759 706 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 ZNF678Q5SXM1 525 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 PIK3R6Q5UE93 754 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 KLC3Q6P597 504 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 DHFR2Q86XF0 187 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 DRAXINQ8NBI3 349 aaPredicted RBP12.34□□□□□ -0.43
VPS33B-201ENST00000333371 FAM81AQ8TBF8 368 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 C19orf60Q96EN9 201 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 HMCESQ96FZ2 354 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 CATSPERBQ9H7T0 1116 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 MAP10Q9P2G4 905 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 SARDHQ9UL12 918 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 DNAJC15Q9Y5T4 150 aa12.34□□□□□ -0.43
VPS33B-201ENST00000333371 A0A1W2PQH9 124 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 UBXN8O00124 270 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 CAPN3P20807 821 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 PSMD8P48556 350 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 TXNL4AP83876 142 aaKnown RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 PLOD1Q02809 727 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 ALFQ53S48 1182 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 SERINC5Q86VE9 423 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 CIR1Q86X95 450 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 CPNE9Q8IYJ1 553 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 TBATAQ96M53 351 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 SLC25A23Q9BV35 468 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 AGO3Q9H9G7 860 aaKnown RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 POLR3BQ9NW08 1133 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 PHF24Q9UPV7 400 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 A0A0J9YYE9 177 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 TMX2-CTNND1H3BSU7 103 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 SEPT4O43236 478 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 TRMUO75648 421 aaKnown RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 ZNF189O75820 626 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 TMCC1O94876 653 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 H6PDO95479 791 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 S1PR4O95977 384 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 MMP2P08253 660 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 FAM163BP0C2L3 166 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 IMPDH1P20839 514 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 GPX3P22352 226 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 OXTRP30559 389 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 GRIK1P39086 918 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 POLD2P49005 469 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 GPR15P49685 360 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 KPNA2P52292 529 aaKnown RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 HPCAP84074 193 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 UGT3A2Q3SY77 523 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 EGFL6Q8IUX8 553 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 SCN4BQ8IWT1 228 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 PTGR2Q8N8N7 351 aaPredicted RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 RTL3Q8N8U3 475 aaKnown RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 GPR152Q8TDT2 470 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 PSMG2Q969U7 264 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 MRM3Q9HC36 420 aaKnown RBP12.33□□□□□ -0.44
VPS33B-201ENST00000333371 NOD1Q9Y239 953 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 GIT1Q9Y2X7 761 aa12.33□□□□□ -0.44
VPS33B-201ENST00000333371 H3BNH8 94 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 PIP5K1BO14986 540 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 CAPN15O75808 1086 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 CDK14O94921 469 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 MT-ND1P03886 318 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 CLCN5P51795 746 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 ZNF33AQ06730 810 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 TRIM32Q13049 653 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 SEMA3AQ14563 771 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 ACAP2Q15057 778 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 MAPRE2Q15555 327 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 OR4D1Q15615 310 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 PFKFB4Q16877 469 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 TBC1D25Q3MII6 688 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 SAMD4BQ5PRF9 694 aaKnown RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 C8orf82Q6P1X6 216 aaPredicted RBP12.32□□□□□ -0.44
VPS33B-201ENST00000333371 ZNF549Q6P9A3 640 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 CD300LGQ6UXG3 332 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 IFNEQ86WN2 208 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 EPHX4Q8IUS5 362 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 DDIASQ8IXT1 998 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 CBR4Q8N4T8 237 aa12.32□□□□□ -0.44
VPS33B-201ENST00000333371 FIBCD1Q8N539 461 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms