RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 NLE1Q9NVX2 485 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 POLR3BQ9NW08 1133 aaPredicted RBP10.76□□□□□ -0.69
CCDC172-201ENST00000333254 CD300AQ9UGN4 299 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 VPS9D1Q9Y2B5 631 aa10.76□□□□□ -0.69
CCDC172-201ENST00000333254 TCRBV3S1A0A5B6 114 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 MTMR11A4FU01 709 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 EIF4E1BA6NMX2 242 aaKnown RBP10.75□□□□□ -0.69
CCDC172-201ENST00000333254 H7C4K7 107 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 NRP2O60462 931 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 DNAJA2O60884 412 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 GPC4O75487 556 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 MATN4O95460 622 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 ALDH1A1P00352 501 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 CD1EP15812 388 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 TACR2P21452 398 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 HOXD9P28356 352 aaPredicted RBP10.75□□□□□ -0.69
CCDC172-201ENST00000333254 OR1G1P47890 313 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 MRPS22P82650 360 aaKnown RBP10.75□□□□□ -0.69
CCDC172-201ENST00000333254 TIAL1Q01085 375 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCDC172-201ENST00000333254 ROR2Q01974 943 aaKnown RBP10.75□□□□□ -0.69
CCDC172-201ENST00000333254 RHDQ02161 417 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 FOLH1Q04609 750 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 GPR158Q5T848 1215 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 ZNF549Q6P9A3 640 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 KLHDC10Q6PID8 442 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 SLC30A9Q6PML9 568 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 CYHR1Q6ZMK1 362 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 GK5Q6ZS86 529 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 EFL1Q7Z2Z2 1120 aaKnown RBP10.75□□□□□ -0.69
CCDC172-201ENST00000333254 AHI1Q8N157 1196 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 SPATA6LQ8N4H0 392 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 TMEM102Q8N9M5 508 aaPredicted RBP10.75□□□□□ -0.69
CCDC172-201ENST00000333254 PHC3Q8NDX5 983 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 OR4L1Q8NH43 312 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 SGF29Q96ES7 293 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 TBATAQ96M53 351 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 RPRD1AQ96P16 312 aaPredicted RBP10.75□□□□□ -0.69
CCDC172-201ENST00000333254 PSKH2Q96QS6 385 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 ATOH8Q96SQ7 321 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 DERL2Q9GZP9 239 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 SPAG4Q9NPE6 437 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 CATSPERZQ9NTU4 200 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 TMEM181Q9P2C4 612 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 MARCH4Q9P2E8 410 aaPredicted RBP10.75□□□□□ -0.69
CCDC172-201ENST00000333254 SEPT3Q9UH03 358 aa10.75□□□□□ -0.69
CCDC172-201ENST00000333254 SLC12A8A0AV02 714 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 CCDC162PA2VCL2 907 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 LCHNA4D1U4 455 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 F5H5T6 163 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 STX16-NPEPL1H3BU86 382 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 FBP2O00757 339 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 UBFD1O14562 309 aaKnown RBP10.74□□□□□ -0.69
CCDC172-201ENST00000333254 STX16O14662 325 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 KLK8O60259 260 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 KERAO60938 352 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 SRP72O76094 671 aaKnown RBP10.74□□□□□ -0.69
CCDC172-201ENST00000333254 CRTAMO95727 393 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 GOT2P00505 430 aaKnown RBP10.74□□□□□ -0.69
CCDC172-201ENST00000333254 OR1E1P30953 314 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 GRK4P32298 578 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 GPR15P49685 360 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 ERFP50548 548 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 ZNF140P52738 457 aaPredicted RBP10.74□□□□□ -0.69
CCDC172-201ENST00000333254 ACLYP53396 1101 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 CDH4P55283 916 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 PKNOX1P55347 436 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 STX1BP61266 288 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 FOXM1Q08050 763 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 TAF10Q12962 218 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 MBTPS1Q14703 1052 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 PABPC1LQ4VXU2 614 aaKnown RBP10.74□□□□□ -0.69
CCDC172-201ENST00000333254 C10orf120Q5SQS8 335 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 KANK2Q63ZY3 851 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 NADSYN1Q6IA69 706 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 OGFOD2Q6N063 350 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 AFTPHQ6ULP2 937 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 CHST9Q7L1S5 443 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 CHCHD4Q8N4Q1 142 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 EFCAB3Q8N7B9 438 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 PCYOX1LQ8NBM8 494 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 HIPK4Q8NE63 616 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 PDZD8Q8NEN9 1154 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.74□□□□□ -0.69
CCDC172-201ENST00000333254 KIAA1191Q96A73 305 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 ZUFSPQ96AP4 578 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 PTERQ96BW5 349 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 C19orf60Q96EN9 201 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 PPP1R36Q96LQ0 422 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 NPAS2Q99743 824 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 TMEM175Q9BSA9 504 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 NUSAP1Q9BXS6 441 aaKnown RBP10.74□□□□□ -0.69
CCDC172-201ENST00000333254 SEZ6LQ9BYH1 1024 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 MUC13Q9H3R2 512 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 ALG9Q9H6U8 611 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 ZNF696Q9H7X3 374 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 PLXNA4Q9HCM2 1894 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 CYP4F12Q9HCS2 524 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 ACSS2Q9NR19 701 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 ABCD2Q9UBJ2 740 aa10.74□□□□□ -0.69
CCDC172-201ENST00000333254 CROTQ9UKG9 612 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms