RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 CHRM1P11229 460 aaPredicted RBP23.29■■□□□ 1.32
TSEN54-201ENST00000333213 METAP1P53582 386 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 LRRC73Q5JTD7 316 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 PTAR1Q7Z6K3 402 aaPredicted RBP23.29■■□□□ 1.32
TSEN54-201ENST00000333213 STRA8Q7Z7C7 330 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 CPNE1Q99829 537 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 STMN4Q9H169 189 aaPredicted RBP23.29■■□□□ 1.32
TSEN54-201ENST00000333213 BPIFA1Q9NP55 256 aa23.29■■□□□ 1.32
TSEN54-201ENST00000333213 F5P12259 2224 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 VCANP13611 3396 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 CCDC162PA2VCL2 907 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 CAPN8A6NHC0 703 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 VGLL3A8MV65 326 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 SLC7A4O43246 635 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 LPOP22079 712 aaPredicted RBP23.28■■□□□ 1.32
TSEN54-201ENST00000333213 ABCG1P45844 678 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 TFF2Q03403 129 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 LAMB3Q13751 1172 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 POM121L1PQ3SYA9 428 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 MROH9Q5TGP6 573 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 NEPROQ6NW34 567 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 TSPAN33Q86UF1 283 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 UCMAQ8WVF2 138 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 SCRN2Q96FV2 425 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 SERAC1Q96JX3 654 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 LYSMD1Q96S90 227 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 POLR3BQ9NW08 1133 aaPredicted RBP23.28■■□□□ 1.32
TSEN54-201ENST00000333213 HACD3Q9P035 362 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 IL17CQ9P0M4 197 aa23.28■■□□□ 1.32
TSEN54-201ENST00000333213 IQANK1A0A1B0GTG1 560 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 C2orf81A6NN90 581 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 RPP40O75818 363 aaKnown RBP23.27■■□□□ 1.32
TSEN54-201ENST00000333213 AHSGP02765 367 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 ATP5DP30049 168 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 HMGCLP35914 325 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 GP5P40197 560 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 SLC1A2P43004 574 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 KIR2DL1P43626 348 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-201ENST00000333213 MPP1Q00013 466 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 ENPP2Q13822 863 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 PREPLQ4J6C6 727 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-201ENST00000333213 SH2D5Q6ZV89 423 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 PAF1Q8N7H5 531 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 OR6P1Q8NGX9 317 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 ERLEC1Q96DZ1 483 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 MCCC1Q96RQ3 725 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-201ENST00000333213 FAM129BQ96TA1 746 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 MFSD1Q9H3U5 465 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 MARCH4Q9P2E8 410 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-201ENST00000333213 PIAS3Q9Y6X2 628 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 EDDM13A0A1B0GTR0 161 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 SHISA7A6NL88 538 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 TRIM49D1C9J1S8 452 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 H0YHG0 523 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 CLDN7O95471 211 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 GOT2P00505 430 aaKnown RBP23.27■■□□□ 1.32
TSEN54-201ENST00000333213 IL9P15248 144 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 GTF2A1P52655 376 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-201ENST00000333213 PRAMEP78395 509 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 ZNF470Q6ECI4 717 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 PTCRAQ6ISU1 281 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-201ENST00000333213 CCDC121Q6ZUS5 278 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 C4orf33Q8N1A6 199 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 KLF6Q99612 283 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-201ENST00000333213 RBBP8Q99708 897 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 TRABDQ9H4I3 376 aa23.27■■□□□ 1.32
TSEN54-201ENST00000333213 C1orf232A0A0U1RR37 186 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 ITGA2BP08514 1039 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 SNRPAP09012 282 aaKnown RBP23.26■■□□□ 1.31
TSEN54-201ENST00000333213 PRSS56P0CW18 603 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 HNRNPLP14866 589 aaKnown RBP eCLIP23.26■■□□□ 1.31
TSEN54-201ENST00000333213 LHCGRP22888 699 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 IFT88Q13099 833 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 THOC5Q13769 683 aaKnown RBP23.26■■□□□ 1.31
TSEN54-201ENST00000333213 MPP2Q14168 576 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 UGP2Q16851 508 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 LACTB2Q53H82 288 aaPredicted RBP23.26■■□□□ 1.31
TSEN54-201ENST00000333213 CRTC1Q6UUV9 634 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 LDB1Q86U70 411 aaPredicted RBP23.26■■□□□ 1.31
TSEN54-201ENST00000333213 CACNA2D3Q8IZS8 1091 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 C2CD4AQ8NCU7 369 aaPredicted RBP23.26■■□□□ 1.31
TSEN54-201ENST00000333213 ACVR1CQ8NER5 493 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 ATXN7L3BQ96GX2 97 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 LRIG1Q96JA1 1093 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 GPR63Q9BZJ6 419 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 ZFYVE1Q9HBF4 777 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 PPM1HQ9ULR3 514 aa23.26■■□□□ 1.31
TSEN54-201ENST00000333213 TSPAN11A1L157 253 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 GOLGA8RI6L899 631 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 RFPL1O75677 317 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 KRT37O76014 449 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 WASP42768 502 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 SEMA3AQ14563 771 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 ZNF805Q5CZA5 627 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 ZNF789Q5FWF6 425 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 HABP4Q5JVS0 413 aaKnown RBP23.25■■□□□ 1.31
TSEN54-201ENST00000333213 GRTP1Q5TC63 336 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 BRAT1Q6PJG6 821 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 SEC16BQ96JE7 1060 aa23.25■■□□□ 1.31
TSEN54-201ENST00000333213 OSBPL1AQ9BXW6 950 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms