RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 M0QZQ0 153 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 RAMP2O60895 175 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 PEX11BO96011 259 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 GOT2P00505 430 aaKnown RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 IMPDH1P20839 514 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 EIF4EBP2Q13542 120 aaPredicted RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 KCNA10Q16322 511 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 SCIMPQ6UWF3 145 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 MON1AQ86VX9 555 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 ABI1Q8IZP0 508 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 NUP93Q8N1F7 819 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 TMEM102Q8N9M5 508 aaPredicted RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 FAM110BQ8TC76 370 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 EXOC2Q96KP1 924 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 SUSD3Q96L08 255 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 AKTIPQ9H8T0 292 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 SAC3D1A6NKF1 404 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 SEPT4O43236 478 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 LINC00032P0C843 101 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 HOXC8P31273 242 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 FOXA1P55317 472 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 SH3BP2P78314 561 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 ECT2LQ008S8 904 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 UNC50Q53HI1 259 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 ZNF678Q5SXM1 525 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 KRT80Q6KB66 452 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 MRPL10Q7Z7H8 261 aaKnown RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 DCP1BQ8IZD4 617 aaKnown RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 PGBD5Q8N414 524 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 FBXO32Q969P5 355 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 UBXN10Q96LJ8 280 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 TRMT13Q9NUP7 481 aaKnown RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 COMMD3-BMI1R4GMX3 469 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 CCDC162PA2VCL2 907 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 C7orf72A4D263 438 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 HSPA1AP0DMV8 641 aaKnown RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 HSPA1BP0DMV9 641 aaKnown RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 RHOQP17081 205 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 CHRM3P20309 590 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 DNAJB1P25685 340 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 MAP7Q14244 749 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 LPIN1Q14693 890 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 RAB44Q7Z6P3 723 aaPredicted RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 KLHDC8BQ8IXV7 354 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 METTL25Q8N6Q8 603 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 SLC29A1Q99808 456 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 TMEM79Q9BSE2 394 aa14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 SEMA4BQ9NPR2 832 aaPredicted RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 UTP6Q9NYH9 597 aaKnown RBP14.06□□□□□ -0.16
ATP2C1-201ENST00000328560 A0A0J9YYE9 177 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 SMIM31A0A1B0GVY4 71 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 FAM149AA5PLN7 773 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 SUPT3HB4E1H0 165 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 PIP5K1BO14986 540 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 CD3EAPO15446 510 aaKnown RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 SLC7A4O43246 635 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 ZNF623O75123 536 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 SUPT3HO75486 399 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 MMP2P08253 660 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 TRIM32Q13049 653 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 DYNC1I2Q13409 638 aaKnown RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 HABP4Q5JVS0 413 aaKnown RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 ARMC3Q5W041 872 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 DHFR2Q86XF0 187 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 TRIML2Q8N7C3 387 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 CANT1Q8WVQ1 401 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 DGCR14Q96DF8 476 aaKnown RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 SEPT5Q99719 369 aaPredicted RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 TLR6Q9Y2C9 796 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 TIMM22Q9Y584 194 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 ALDOCP09972 364 aaKnown RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 UGT1A6P19224 532 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 FMO4P31512 558 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 RHDQ02161 417 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 GRB7Q14451 532 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 CHSY3Q70JA7 882 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 KLHDC9Q8NEP7 349 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 ESAMQ96AP7 390 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 PRICKLE1Q96MT3 831 aaPredicted RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 UROC1Q96N76 676 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 SMIM14Q96QK8 99 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 UPF3AQ9H1J1 476 aaKnown RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 VPS45Q9NRW7 570 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 MARCH2Q9P0N8 246 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 ANKRD12Q6UB98 2062 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 SAMD4BQ5PRF9 694 aaKnown RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 ZNF549Q6P9A3 640 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 ZBTB49Q6ZSB9 765 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 EGFL6Q8IUX8 553 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 UMODL1-AS1Q8N2C9 162 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 DCBLD1Q8N8Z6 715 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 PCSK9Q8NBP7 692 aaKnown RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 TRIB2Q92519 343 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 PBXIP1Q96AQ6 731 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 RMDN1Q96DB5 314 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 CYP2S1Q96SQ9 504 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 MFSD1Q9H3U5 465 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 PIF1Q9H611 641 aa14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 MRPL40Q9NQ50 206 aaKnown RBP14.05□□□□□ -0.16
ATP2C1-201ENST00000328560 SUCOQ9UBS9 1254 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms