RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 TRPV2Q9Y5S1 764 aa12.91□□□□□ -0.34
HMGCS1-201ENST00000325110 PRSS51A0A1B0GVH4 220 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 MYADML2A6NDP7 307 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 DENRO43583 198 aaKnown RBP12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 SNX2O60749 519 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 TRMUO75648 421 aaKnown RBP12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 PCSK6P29122 969 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 FOXA1P55317 472 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 KCNK10P57789 538 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 GRB7Q14451 532 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 HERC3Q15034 1050 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 PLCL1Q15111 1095 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 PCBP1Q15365 356 aaKnown RBP eCLIP12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 TIGD2Q4W5G0 525 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 PM20D1Q6GTS8 502 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 SH3RF2Q8TEC5 729 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 SPC25Q9HBM1 224 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 RBM47A0AV96 593 aaKnown RBP12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 PLOD2O00469 737 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 AZIN1O14977 448 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 CELF2O95319 508 aaKnown RBP12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 EEF1DP29692 281 aaKnown RBP12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 ADSLP30566 484 aaPredicted RBP12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 HK2P52789 917 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 TAF2Q6P1X5 1199 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 DNAJC14Q6Y2X3 702 aaPredicted RBP12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 CHST15Q7LFX5 561 aaPredicted RBP12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 FBXO39Q8N4B4 442 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 DTNBP1Q96EV8 351 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 SLC25A51Q9H1U9 297 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 ATXN10Q9UBB4 475 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 PADI3Q9ULW8 664 aa12.9□□□□□ -0.34
HMGCS1-201ENST00000325110 BTN3A1O00481 513 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ACOT8O14734 319 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 VILLO15195 856 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 NOL3O60936 208 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 CHEK2O96017 543 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 GOT2P00505 430 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ASLP04424 464 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ATP6V1B2P21281 511 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 FASP25445 335 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 YAP1P46937 504 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 IL1RL1Q01638 556 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 TAS2R42Q7RTR8 314 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 GPR141Q7Z602 305 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 CLYBLQ8N0X4 340 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 CPSF7Q8N684 471 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 FBXO32Q969P5 355 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 SERPINB11Q96P15 392 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 IL12RB2Q99665 862 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 TRIM62Q9BVG3 475 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 OSBPL11Q9BXB4 747 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 TRIM15Q9C019 465 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 BPIFA1Q9NP55 256 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 GMIPQ9P107 970 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ACTL7AQ9Y615 435 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ZNF638Q14966 1978 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 CLOCKO15516 846 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 GMNNO75496 209 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 DIO3P55073 304 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 INHBEP58166 350 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 MAP2K5Q13163 448 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 GRM2Q14416 872 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 RABL3Q5HYI8 236 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 BRMS1LQ5PSV4 323 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 RANBP10Q6VN20 620 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 CHSY3Q70JA7 882 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 CILP2Q8IUL8 1156 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 OR2T34Q8NGX1 318 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 OR2T3Q8NH03 318 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 FAM81AQ8TBF8 368 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ACOX2Q99424 681 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ING2Q9H160 280 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 CD274Q9NZQ7 290 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 RSL24D1Q9UHA3 163 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 E5RI56 91 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 CD3EAPO15446 510 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 KATNA1O75449 491 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 HNRNPCP07910 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 GNAO1P09471 354 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ITGB6P18564 788 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 NFKBIAP25963 317 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ACVRL1P37023 503 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 C16orf72Q14CZ0 275 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ACAP2Q15057 778 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 FAM110CQ1W6H9 321 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 SIRPB2Q5JXA9 342 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 PTERQ96BW5 349 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 THAP11Q96EK4 314 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 RNF145Q96MT1 663 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ACBD6Q9BR61 282 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 SUCOQ9UBS9 1254 aaKnown RBP12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 ZNF711Q9Y462 761 aa12.89□□□□□ -0.35
HMGCS1-201ENST00000325110 A0A0U1RQS6 177 aa12.88□□□□□ -0.35
HMGCS1-201ENST00000325110 HHLA1C9JL84 531 aa12.88□□□□□ -0.35
HMGCS1-201ENST00000325110 SOCS2O14508 198 aa12.88□□□□□ -0.35
HMGCS1-201ENST00000325110 UBFD1O14562 309 aaKnown RBP12.88□□□□□ -0.35
HMGCS1-201ENST00000325110 H6PDO95479 791 aa12.88□□□□□ -0.35
HMGCS1-201ENST00000325110 CYP2C18P33260 490 aa12.88□□□□□ -0.35
HMGCS1-201ENST00000325110 ZNF135P52742 658 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms