RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	OR56A4	Q8NGH8	313 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	OR6Y1	Q8NGX8	325 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	CADM1	Q9BY67	442 aa	Known RBP	11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	DPY30	Q9C005	99 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	BCOR	Q6W2J9	1755 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	ECM29	Q5VYK3	1845 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771		A0A087X1B8	175 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	ZBTB14	O43829	449 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	GRIA3	P42263	894 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	CREB5	Q02930	508 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	TIGD2	Q4W5G0	525 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	LPCAT4	Q643R3	524 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	FAM45BP	Q6NSW5	357 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	FBXL19	Q6PCT2	694 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	CLDN19	Q8N6F1	224 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	FAM45A	Q8TCE6	357 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	C10orf82	Q8WW14	230 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	OPTC	Q9UBM4	332 aa		11.85	□□□□□ -0.51
DDR1-223	ENST00000324771	EVPLL	A8MZ36	301 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	SYN3	O14994	580 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	MTX2	O75431	263 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ADH1A	P07327	375 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	IL4R	P24394	825 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	CCNH	P51946	323 aa	Predicted RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	FNDC3B	Q53EP0	1204 aa	Known RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	CACHD1	Q5VU97	1274 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	SLAIN1	Q8ND83	568 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	OTULIN	Q96BN8	352 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	MAGED4	Q96JG8	741 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	RNF145	Q96MT1	663 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	EMILIN2	Q9BXX0	1053 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	VTI1B	Q9UEU0	232 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ZNF180	Q9UJW8	692 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	MTMR11	A4FU01	709 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	PDZK1P1	A8MUH7	402 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	TMCC1	O94876	653 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	GGT5	P36269	586 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	RFX3	P48380	749 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	MORN1	Q5T089	497 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	HJURP	Q8NCD3	748 aa	Predicted RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ELMO1	Q92556	727 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	JADE3	Q92613	823 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	PRR11	Q96HE9	360 aa	Predicted RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	CCT7	Q99832	543 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	PRDM16	Q9HAZ2	1276 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	STX18	Q9P2W9	335 aa	Known RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	WASF2	Q9Y6W5	498 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	SHANK3	Q9BYB0	1731 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	RGSL1	A5PLK6	1076 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	C8A	P07357	584 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	SLC10A3	P09131	477 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	CYP51A1	Q16850	503 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	LSM12	Q3MHD2	195 aa	Known RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	SLC9B1	Q4ZJI4	515 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	MS4A13	Q5J8X5	152 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	RTP2	Q5QGT7	225 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	LRRC49	Q8IUZ0	686 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ZMIZ2	Q8NF64	920 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	PAWR	Q96IZ0	340 aa	Known RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	OR52B2	Q96RD2	323 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	TSPAN18	Q96SJ8	248 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ATG10	Q9H0Y0	220 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ATP13A3	Q9H7F0	1226 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771		Q9Y3F1	56 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	DOCK2	Q92608	1830 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ARHGAP10	A1A4S6	786 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	OR2AG2	A6NM03	316 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	NIPSNAP2	O75323	286 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	TCEA3	O75764	348 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	IPO13	O94829	963 aa	Known RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	GLUD1	P00367	558 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	PSMA4	P25789	261 aa	Known RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ALDH9A1	P49189	494 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	SLC7A2	P52569	658 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	MAPK10	P53779	464 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	YBEY	P58557	167 aa	Predicted RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	PSME3	P61289	254 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	SNRPD1	P62314	119 aa	Known RBP	11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	CDC16	Q13042	620 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	PWP1	Q13610	501 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	TRIM60	Q495X7	471 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	TMEM199	Q8N511	208 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	SELENOM	Q8WWX9	145 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	ZFYVE1	Q9HBF4	777 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	GIMAP2	Q9UG22	337 aa		11.84	□□□□□ -0.51
DDR1-223	ENST00000324771	FAM159B	A6NKW6	160 aa		11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	AZIN1	O14977	448 aa		11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	SLC25A14	O95258	325 aa	Predicted RBP	11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	PKM	P14618	531 aa	Known RBP	11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	LBP	P18428	481 aa		11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	SERPINA13P	Q6UXR4	307 aa		11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	TMC5	Q6UXY8	1006 aa		11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	IGSF8	Q969P0	613 aa		11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	PPP2R3C	Q969Q6	453 aa		11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	CCDC134	Q9H6E4	229 aa		11.83	□□□□□ -0.52
DDR1-223	ENST00000324771		A0A1B0GVM2	712 aa		11.83	□□□□□ -0.52
DDR1-223	ENST00000324771	TCAF2	A6NFQ2	919 aa		11.83	□□□□□ -0.52

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