RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 SLC8A2Q9UPR5 921 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 LRCH1Q9Y2L9 728 aa12.81□□□□□ -0.36
DDX39A-202ENST00000324340 ANKRD66B4E2M5 251 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 LDB2O43679 373 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 CDH16O75309 829 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 KAT7O95251 611 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 SP100P23497 879 aaPredicted RBP12.8□□□□□ -0.36
DDX39A-202ENST00000324340 PSMA3P25788 255 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 NMBRP28336 390 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 GRIA2P42262 883 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 GRIA4P48058 902 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 OCRLQ01968 901 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 BCL2L1Q07817 233 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 GALNT3Q14435 633 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 AAK1Q2M2I8 961 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 ARMC12Q5T9G4 340 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 TRMT10BQ6PF06 316 aaKnown RBP12.8□□□□□ -0.36
DDX39A-202ENST00000324340 DPY19L3Q6ZPD9 716 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 NLRP9Q7RTR0 991 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 CAMK1DQ8IU85 385 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.8□□□□□ -0.36
DDX39A-202ENST00000324340 TTC8Q8TAM2 541 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 BRSK1Q8TDC3 778 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 PIH1D2Q8WWB5 315 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 NCSTNQ92542 709 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 ZNF669Q96BR6 464 aaPredicted RBP12.8□□□□□ -0.36
DDX39A-202ENST00000324340 ECHDC3Q96DC8 303 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 CERS2Q96G23 380 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 ZNF778Q96MU6 729 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 ZNF641Q96N77 438 aaPredicted RBP12.8□□□□□ -0.36
DDX39A-202ENST00000324340 KCNK12Q9HB15 430 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 SCOCQ9UIL1 159 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 TMCO1Q9UM00 188 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 PLA2G4CQ9UP65 541 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 GMEB1Q9Y692 573 aa12.8□□□□□ -0.36
DDX39A-202ENST00000324340 A0A1W2PQ67 120 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 TTC34A8MYJ7 566 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 SERPINA4P29622 427 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 ST8SIA6P61647 398 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 ACVR1Q04771 509 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 RAD51Q06609 339 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 NAB1Q13506 487 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 EFTUD2Q15029 972 aaKnown RBP eCLIP12.79□□□□□ -0.368e-7■■■■□ 26.6
DDX39A-202ENST00000324340 SKIV2LQ15477 1246 aaKnown RBP12.79□□□□□ -0.36
DDX39A-202ENST00000324340 TSTD2Q5T7W7 516 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 ADGRD1Q6QNK2 874 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 Q6ZVU0 165 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 SLC44A3Q8N4M1 653 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 DEFB123Q8N688 67 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 LPCAT1Q8NF37 534 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 OR6K2Q8NGY2 324 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 CSGALNACT1Q8TDX6 532 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 UCMAQ8WVF2 138 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 SLC44A1Q8WWI5 657 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 CKAP2Q8WWK9 683 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 DNASE1L2Q92874 299 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 PTPRN2Q92932 1015 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 RMDN1Q96DB5 314 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 LRIG1Q96JA1 1093 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 PAFAH2Q99487 392 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 SELENOSQ9BQE4 189 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 TUBB6Q9BUF5 446 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 TMEM245Q9H330 911 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 DCLRE1BQ9H816 532 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 SMYD2Q9NRG4 433 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 KLHL14Q9P2G3 628 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 STOML1Q9UBI4 398 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 PPIL1Q9Y3C6 166 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 STARD13Q9Y3M8 1113 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 ACTL7BQ9Y614 415 aa12.79□□□□□ -0.36
DDX39A-202ENST00000324340 TLDC2A0PJX2 215 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 TBC1D3BA6NDS4 549 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 CXorf49A8MYA2 514 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 PIGNO95427 931 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 APODP05090 189 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 TPBGLP0DKB5 382 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 HNRNPLP14866 589 aaKnown RBP eCLIP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 GKP32189 559 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 RECQLP46063 649 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 SLCO1A2P46721 670 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 ARCN1P48444 511 aaKnown RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 MGAT5Q09328 741 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 SFSWAPQ12872 951 aaKnown RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 ENPP2Q13822 863 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 TAF1AQ15573 450 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 HNRNPA1L2Q32P51 320 aaKnown RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 KIAA0930Q6ICG6 404 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 CES3Q6UWW8 571 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 NUDT18Q6ZVK8 323 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 MARK2Q7KZI7 788 aaKnown RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 LRRC6Q86X45 466 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 SFTPA1Q8IWL2 248 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 UNC5BQ8IZJ1 945 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 RYBPQ8N488 228 aaPredicted RBP12.78□□□□□ -0.36
DDX39A-202ENST00000324340 MDM1Q8TC05 714 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 HCAR2Q8TDS4 363 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 DCAKDQ8WVC6 231 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 DNAJC9Q8WXX5 260 aa12.78□□□□□ -0.36
DDX39A-202ENST00000324340 NR1H4Q96RI1 486 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms