RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 RABGGTBP53611 331 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 MLLT10P55197 1068 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 ZNF280AP59817 542 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 POU4F1Q01851 419 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 OTUD3Q5T2D3 398 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 NT5C3BQ969T7 300 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 SNX27Q96L92 541 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 TBL1YQ9BQ87 522 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 BEGAINQ9BUH8 593 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 C8orf4Q9NR00 106 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-202ENST00000321728 FBXO5Q9UKT4 447 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 B3GNT3Q9Y2A9 372 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 SNX10Q9Y5X0 201 aa17.92■□□□□ 0.46
PRKCB-202ENST00000321728 NFKBIEO00221 500 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 ALBP02768 609 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 NCAM1P13591 858 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 SLC6A2P23975 617 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 EEF1DP29692 281 aaKnown RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 ATP4BP51164 291 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 SFRP1Q8N474 314 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 MINDY1Q8N5J2 469 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 RAB2BQ8WUD1 216 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 CNDP2Q96KP4 475 aaKnown RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 MUS81Q96NY9 551 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 SEPHS2Q99611 448 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 YTHDF1Q9BYJ9 559 aaKnown RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 RAD21L1Q9H4I0 556 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 GSTO2Q9H4Y5 243 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 PTGDR2Q9Y5Y4 395 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 GPC6Q9Y625 555 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 MRPL42Q9Y6G3 142 aaKnown RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 ZFC3H1O60293 1989 aaKnown RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 TTC24A2A3L6 582 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 I6L893 689 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 CNOT3O75175 753 aaKnown RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 GSTT2P0CG29 244 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 GSTT2BP0CG30 244 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 RPS6KA2Q15349 733 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 CRYBG2Q8N1P7 616 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 PDPRQ8NCN5 879 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 PDZD8Q8NEN9 1154 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 DNAJB14Q8TBM8 379 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 LRRC58Q96CX6 371 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 KLRG1Q96E93 195 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 OLFM1Q99784 485 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 MAF1Q9H063 256 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 ADNPQ9H2P0 1102 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 RMI1Q9H9A7 625 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 GIN1Q9NXP7 522 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 WARS2Q9UGM6 360 aaKnown RBP17.91■□□□□ 0.46
PRKCB-202ENST00000321728 DSEQ9UL01 958 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 TMED5Q9Y3A6 229 aa17.91■□□□□ 0.46
PRKCB-202ENST00000321728 FXYD1O00168 92 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 CLDN5O00501 218 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 SYNCRIPO60506 623 aaKnown RBP17.9■□□□□ 0.46
PRKCB-202ENST00000321728 LDLRP01130 860 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 LTA4HP09960 611 aaKnown RBP17.9■□□□□ 0.46
PRKCB-202ENST00000321728 DNAJB2P25686 324 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 SLC26A2P50443 739 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 CDH13P55290 713 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 PERM1Q5SV97 790 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 BROXQ5VW32 411 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 MIER2Q8N344 545 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 BEST2Q8NFU1 509 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.9■□□□□ 0.462e-10■■■■■ 82.5
PRKCB-202ENST00000321728 FICDQ9BVA6 458 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 LHPPQ9H008 270 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 DGKBQ9Y6T7 804 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 SEC14L2O76054 403 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 RBP1P09455 135 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 ZNF286BP0CG31 522 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 NR4A1P22736 598 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 TKTL1P51854 596 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 USP51Q70EK9 711 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 PNPLA1Q8N8W4 532 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 GOLM1Q8NBJ4 401 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 C2CD4AQ8NCU7 369 aaPredicted RBP17.9■□□□□ 0.46
PRKCB-202ENST00000321728 CASP10Q92851 521 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 EXT2Q93063 718 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 SLX1AQ9BQ83 275 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 PLEKHA5Q9HAU0 1116 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 INTS10Q9NVR2 710 aaKnown RBP17.9■□□□□ 0.46
PRKCB-202ENST00000321728 ANAPC2Q9UJX6 822 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 ANKRD12Q6UB98 2062 aa17.9■□□□□ 0.46
PRKCB-202ENST00000321728 KDM1AO60341 852 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 BEST1O76090 585 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 OPRL1P41146 370 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 FUT11Q495W5 492 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 ZNF789Q5FWF6 425 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 BTLAQ7Z6A9 289 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 SLC22A9Q8IVM8 553 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 SULF1Q8IWU6 871 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 LRRC52Q8N7C0 313 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 CSF3RQ99062 836 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 MPHOSPH6Q99547 160 aaKnown RBP17.89■□□□□ 0.45
PRKCB-202ENST00000321728 ATXN3LQ9H3M9 355 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 ALG9Q9H6U8 611 aa17.89■□□□□ 0.45
PRKCB-202ENST00000321728 AAR2Q9Y312 384 aaKnown RBP17.89■□□□□ 0.45
PRKCB-202ENST00000321728 PSMD3O43242 534 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms