RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 HSD17B3P37058 310 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 ETV3P41162 512 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 TPMTP51580 245 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 TAS2R38P59533 333 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 PTSQ03393 145 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 TTC31Q49AM3 519 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 BEND6Q5SZJ8 279 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 KDM7AQ6ZMT4 941 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 OTUD6BQ8N6M0 293 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 OR13J1Q8NGT2 312 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 OR6P1Q8NGX9 317 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 NAT14Q8WUY8 206 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 TBATAQ96M53 351 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 MYOCQ99972 504 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 MAGEE1Q9HCI5 957 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 ARFGAP3Q9NP61 516 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 SPATA6Q9NWH7 488 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 DKK3Q9UBP4 350 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 EBF1Q9UH73 591 aa15.41■□□□□ 0.06
PDLIM5-202ENST00000318007 FAM86C2PA6NEL3 165 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 CHURC1-FNTBB4DL54 471 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 STX7O15400 261 aaKnown RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 SHBGP04278 402 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TUBBP07437 444 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 MMP12P39900 470 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 LIG3P49916 1009 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 RPL26P61254 145 aaKnown RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 RALGDSQ12967 914 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 ACOX1Q15067 660 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TAF1AQ15573 450 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 HSF5Q4G112 596 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 ANKRD20A4Q4UJ75 823 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 SEL1L3Q68CR1 1132 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 FAM151BQ6UXP7 276 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 HSD11B1LQ7Z5J1 315 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 PTAR1Q7Z6K3 402 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 LDB1Q86U70 411 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 EIF1ADQ8N9N8 165 aaKnown RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 HDAC10Q969S8 669 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 MCCC1Q96RQ3 725 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TXLNGYQ9BZA5 131 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 FAM96AQ9H5X1 160 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 C20orf96Q9NUD7 363 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 FKBPLQ9UIM3 349 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 RPL26L1Q9UNX3 145 aaKnown RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 PKP3Q9Y446 797 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 WDR87Q6ZQQ6 2873 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3DA0A087WVF3 549 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3IA0A087WXS9 549 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3EA0A087X179 549 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3KA0A087X1G2 549 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TCRBV9S1A1TA0A576 114 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TSPAN11A1L157 253 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3FA6NER0 549 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3LB9A6J9 549 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 AP3B1O00203 1094 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TTC4O95801 387 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 C1SP09871 688 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3HP0C7X1 549 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 VIPR1P32241 457 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 CDKN3Q16667 212 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TSTD2Q5T7W7 516 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3GQ6DHY5 549 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3CQ6IPX1 549 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 Q6ZVL8 140 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TBC1D3Q8IZP1 549 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TTC30BQ8N4P2 665 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 DEFB119Q8N690 84 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 FBF1Q8TES7 1133 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 SCAMP4Q969E2 229 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 CAVIN3Q969G5 261 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 CLDN23Q96B33 292 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 KIFC1Q9BW19 673 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 FOXP3Q9BZS1 431 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 TSPYL1Q9H0U9 437 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 EPB41L4BQ9H329 900 aa15.4■□□□□ 0.06
PDLIM5-202ENST00000318007 ZCWPW2A0A1B0GU75 182 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 MROH6A6NGR9 719 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 EIF3HO15372 352 aaKnown RBP eCLIP15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 CYP2A6P11509 494 aaPredicted RBP15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 LPOP22079 712 aaPredicted RBP15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 ZNF140P52738 457 aaPredicted RBP15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 ADPRHP54922 357 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 PRAMEP78395 509 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 DMWDQ09019 674 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 HSP90AA5PQ58FG0 334 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 CTAGE3PQ8IX95 158 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 SPEM1Q8N4L4 309 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 AGAP2Q99490 1192 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 HDAC8Q9BY41 377 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 FADS3Q9Y5Q0 445 aa15.39■□□□□ 0.05
PDLIM5-202ENST00000318007 FAM237BA0A1B0GVD1 139 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 IGLON5A6NGN9 336 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 C6P13671 934 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 AOC1P19801 751 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 HMGCLP35914 325 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 ABCG1P45844 678 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 SLCO1A2P46721 670 aa15.38■□□□□ 0.05
PDLIM5-202ENST00000318007 CXCL12P48061 93 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms