RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 DOK1Q99704 481 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 NPLQ9BXD5 320 aaPredicted RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 TSPYL2Q9H2G4 693 aaPredicted RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 CATSPERBQ9H7T0 1116 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 TTC24A2A3L6 582 aaPredicted RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 NR5A2O00482 541 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 F2P00734 622 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 FASP25445 335 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ENTPD1P49961 510 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 CCT8P50990 548 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 WNT3AP56704 352 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 HERVK_113P63132 956 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ADAM17P78536 824 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ELMSAN1Q6PJG2 1045 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 PHYKPLQ8IUZ5 450 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ADGRG5Q8IZF4 528 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ZNF420Q8TAQ5 688 aaPredicted RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 GTF3C2Q8WUA4 911 aaPredicted RBP19.13■□□□□ 0.65
RTN4-201ENST00000317610 ERVK-6Q9BXR3 956 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 SIK2Q9H0K1 926 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ALG9Q9H6U8 611 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 CD320Q9NPF0 282 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 OSER1Q9NX31 292 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 CMTM6Q9NX76 183 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 AURKCQ9UQB9 309 aa19.13■□□□□ 0.65
RTN4-201ENST00000317610 ACOX3O15254 700 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 RASAL1O95294 804 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 ZBTB7AO95365 584 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 CAPN3P20807 821 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 PSMA4P25789 261 aaKnown RBP19.12■□□□□ 0.65
RTN4-201ENST00000317610 COQ5Q5HYK3 327 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 BRMS1LQ5PSV4 323 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 LYSMD3Q7Z3D4 306 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 SPPL2CQ8IUH8 684 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 COLGALT2Q8IYK4 626 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 OR13J1Q8NGT2 312 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 PPP1R13LQ8WUF5 828 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 ZFP42Q96MM3 310 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 ASB2Q96Q27 587 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 SPON1Q9HCB6 807 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 DNAJC15Q9Y5T4 150 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 MAGEB3O15480 346 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 IRAK2O43187 625 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 MATN4O95460 622 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 TTKP33981 857 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 CDKN2DP55273 166 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 FOXM1Q08050 763 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 KIF19Q2TAC6 998 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 NOMO2Q5JPE7 1267 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 CMTR2Q8IYT2 770 aaKnown RBP19.12■□□□□ 0.65
RTN4-201ENST00000317610 MIER2Q8N344 545 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 SEPT8Q92599 483 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 NDFIP2Q9NV92 336 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 CACNG4Q9UBN1 327 aa19.12■□□□□ 0.65
RTN4-201ENST00000317610 TRIM64BA6NI03 449 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 SLC7A4O43246 635 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 TSPAN8P19075 237 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 UGT1A6P19224 532 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 SLC6A2P23975 617 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 SH3BP2P78314 561 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 GPR158Q5T848 1215 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 KDELC2Q7Z4H8 507 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 LRRC49Q8IUZ0 686 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 SMYD1Q8NB12 490 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 KLHL23Q8NBE8 558 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 MUC3BQ9H195 1237 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 SLC25A51Q9H1U9 297 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 TIMM13Q9Y5L4 95 aaPredicted RBP19.11■□□□□ 0.65
RTN4-201ENST00000317610 DYTNA2CJ06 578 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 PAGE1O75459 146 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 S1PR4O95977 384 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 GPIP06744 558 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 DCKP27707 260 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 SERPINH1P50454 418 aaKnown RBP19.11■□□□□ 0.65
RTN4-201ENST00000317610 VPS26BQ4G0F5 336 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 TMTC4Q5T4D3 741 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 TRPV3Q8NET8 790 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 PTERQ96BW5 349 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 TRIM62Q9BVG3 475 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 MUC13Q9H3R2 512 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 MFSD1Q9H3U5 465 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 SLC52A3Q9NQ40 469 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 SDR39U1Q9NRG7 319 aaPredicted RBP19.11■□□□□ 0.65
RTN4-201ENST00000317610 POLR3BQ9NW08 1133 aaPredicted RBP19.11■□□□□ 0.65
RTN4-201ENST00000317610 GID8Q9NWU2 228 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 CDC14AQ9UNH5 594 aa19.11■□□□□ 0.65
RTN4-201ENST00000317610 FAM149AA5PLN7 773 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 ARPC2O15144 300 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 CDK14O94921 469 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 FCGR1AP12314 374 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 IQSEC1Q6DN90 963 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 MYLPFQ96A32 169 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 CXorf21Q9HAI6 301 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 IL1RL2Q9HB29 575 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 SLC38A7Q9NVC3 462 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 PCDHA9Q9Y5H5 950 aa19.1■□□□□ 0.65
RTN4-201ENST00000317610 TNPO2O14787 897 aaKnown RBP19.09■□□□□ 0.65
RTN4-201ENST00000317610 ANGPT2O15123 496 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 PEX11BO96011 259 aa19.09■□□□□ 0.65
RTN4-201ENST00000317610 GFAPP14136 432 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms