RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CNSTQ6PJW8 725 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 SPATA19Q7Z5L4 167 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 AKAP14Q86UN6 197 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 SPPL2CQ8IUH8 684 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 HEXDCQ8WVB3 486 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 NXNL1Q96CM4 212 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 UBXN10Q96LJ8 280 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 FCRL5Q96RD9 977 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 NPY6RQ99463 290 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 SH3GL1Q99961 368 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 KCTD14Q9BQ13 255 aaPredicted RBP4.79□□□□□ -1.64
PTPN13-201ENST00000316707 ALG2Q9H553 416 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 SCN3BQ9NY72 215 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 SNTG2Q9NY99 539 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 ADAMTS5Q9UNA0 930 aa4.79□□□□□ -1.64
PTPN13-201ENST00000316707 DYRK3O43781 588 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 RSL1D1O76021 490 aaKnown RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PRSS23O95084 383 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 RAP2AP10114 183 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 HNRNPLP14866 589 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SULT1E1P49888 294 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 TPTEP56180 551 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 BACE1P56817 501 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CDC42EP1Q00587 391 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ECT2LQ008S8 904 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 GNA12Q03113 381 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF484Q5JVG2 852 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PRSS48Q7RTY5 328 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SLCO6A1Q86UG4 719 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ARMC8Q8IUR7 673 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 EPHX4Q8IUS5 362 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 RHOXF1Q8NHV9 184 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PPP1R36Q96LQ0 422 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 TSGA13Q96PP4 275 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 AGAP2Q99490 1192 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 LRRC3Q9BY71 257 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ENPP5Q9UJA9 477 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF229Q9UJW7 825 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF214Q9UL59 606 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF99A8MXY4 864 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 DLGAP1O14490 977 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 UGT2B11O75310 529 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 FARP2O94887 1054 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PAPSS2O95340 614 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PTTG1O95997 202 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 AHSGP02765 367 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PPP5CP53041 499 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CXCR4P61073 352 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CSNK2BP67870 215 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ACOT1Q86TX2 421 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 KLHDC8BQ8IXV7 354 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 BPIFB6Q8NFQ5 453 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 OR6Q1Q8NGQ2 317 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 TRIB2Q92519 343 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 NT5C3BQ969T7 300 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 TUBGCP3Q96CW5 907 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 MLPHQ9BV36 600 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 MMP27Q9H306 513 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 NANOGQ9H9S0 305 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 AKIP1Q9NQ31 210 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 FAM49BQ9NUQ9 324 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 DNAJB9Q9UBS3 223 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PCDHB3Q9Y5E6 796 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 MYH1P12882 1939 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 MYH4Q9Y623 1939 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 E2F8A0AVK6 867 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ACOX3O15254 700 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 OXSR1O95747 527 aaPredicted RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 JCHAINP01591 159 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 JUNP05412 331 aaKnown RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 GNAO1P09471 354 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CRHBPP24387 322 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 LAMC2Q13753 1193 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 CSHL1Q14406 222 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 KCTD2Q14681 263 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SLC14A2Q15849 920 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ZNF470Q6ECI4 717 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 BLOC1S3Q6QNY0 202 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 STK32CQ86UX6 486 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 AMER2Q8N7J2 671 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 TANKQ92844 425 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 C19orf60Q96EN9 201 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 FBXL20Q96IG2 436 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 MUS81Q96NY9 551 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ALPK1Q96QP1 1244 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 NDEL1Q9GZM8 345 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SYTL2Q9HCH5 934 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 DIABLOQ9NR28 239 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 FNIP2Q9P278 1114 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 OAS3Q9Y6K5 1087 aaKnown RBP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 NR5A2O00482 541 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SLC7A4O43246 635 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SCELO95171 688 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 SEC24AO95486 1093 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PFKMP08237 780 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 GPX3P22352 226 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 GRM5P41594 1212 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 ORC1Q13415 861 aa4.78□□□□□ -1.64
PTPN13-201ENST00000316707 PCBP1Q15365 356 aaKnown RBP eCLIP4.78□□□□□ -1.64
PTPN13-201ENST00000316707 DCAF4L1Q3SXM0 396 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms