RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SAR1AQ9NR31 198 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 GIMAP4Q9NUV9 329 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 WNK3Q9BYP7 1800 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 UGT1A9O60656 530 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 SH3BGRLO75368 114 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 VAV1P15498 845 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 ABRQ12979 859 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 TMEM259Q4ZIN3 620 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 RPAINQ86UA6 219 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 TTC9BQ8N6N2 239 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 CATSPER1Q8NEC5 780 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 FAM162AQ96A26 154 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 TIFAQ96CG3 184 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 KLHL32Q96NJ5 620 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 GPR21Q99679 349 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 HERPUD2Q9BSE4 406 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 UGT1A7Q9HAW7 530 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 UGT1A10Q9HAW8 530 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 UGT1A8Q9HAW9 530 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 SYNDIG1LA6NDD5 238 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 CDK14O94921 469 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 RING1Q06587 406 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 ZNF33AQ06730 810 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 USP4Q13107 963 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 PGS1Q32NB8 556 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 SPOCK2Q92563 424 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 C1orf74Q96LT6 269 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 RMND5AQ9H871 391 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 USP29Q9HBJ7 922 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 COPG2Q9UBF2 871 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 FETUBQ9UGM5 382 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 PCDHB1Q9Y5F3 818 aa13.69□□□□□ -0.22
DDX54-202ENST00000314045 LBPP18428 481 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 FAM171BQ6P995 826 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 CDYL2Q8N8U2 506 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 MAGEC3Q8TD91 643 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 SELENOMQ8WWX9 145 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 RIPOR3Q96MK2 946 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 TEX264Q9Y6I9 313 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 ZNF840PA6NDX5 716 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 PLIN3O60664 434 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 ALDH1A2O94788 518 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 MLYCDO95822 493 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 TIMP1P01033 207 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 DNTTP04053 509 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 CACNG1Q06432 222 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 OLIG2Q13516 323 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 TEAD2Q15562 447 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 EML3Q32P44 896 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 RRM2BQ7LG56 351 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 OVCA2Q8WZ82 227 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 TCF12Q99081 682 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 CXCL16Q9H2A7 254 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 COPS7BQ9H9Q2 264 aaPredicted RBP13.68□□□□□ -0.22
DDX54-202ENST00000314045 TMEM248Q9NWD8 314 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 FAM32AQ9Y421 112 aaKnown RBP13.68□□□□□ -0.22
DDX54-202ENST00000314045 ATP6AP2A0A1C7CYW4 349 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 PEX11AO75192 247 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 TCEA3O75764 348 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 ATP6AP2O75787 350 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 SEMG2Q02383 582 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 TBL3Q12788 808 aaKnown RBP13.68□□□□□ -0.22
DDX54-202ENST00000314045 RCN1Q15293 331 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 TCEA2Q15560 299 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 ARHGAP36Q6ZRI8 547 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 UBR7Q8N806 425 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 AP2M1Q96CW1 435 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 BTBD10Q9BSF8 475 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 WDR41Q9HAD4 459 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 PNPOQ9NVS9 261 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 SAGE1Q9NXZ1 904 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 ZNHIT2Q9UHR6 403 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 NDUFAF1Q9Y375 327 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 WNT6Q9Y6F9 365 aa13.68□□□□□ -0.22
DDX54-202ENST00000314045 SSC5DA1L4H1 1573 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 NBNO60934 754 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 POLD2P49005 469 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 PRIM2P49643 509 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 MAD2L1Q13257 205 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 RNF43Q68DV7 783 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 SCIMPQ6UWF3 145 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 FAM126BQ8IXS8 530 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 ST13P4Q8IZP2 240 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 MIER2Q8N344 545 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 OR13C4Q8NGS5 318 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TOX2Q96NM4 488 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 CDK5RAP2Q96SN8 1893 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TMEM216Q9P0N5 145 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3DA0A087WVF3 549 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3IA0A087WXS9 549 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3EA0A087X179 549 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3KA0A087X1G2 549 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3FA6NER0 549 aaPredicted RBP13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3LB9A6J9 549 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 MRASO14807 208 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 VPS4BO75351 444 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 TBC1D3HP0C7X1 549 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 EPHA3P29320 983 aa13.67□□□□□ -0.22
DDX54-202ENST00000314045 ECT2LQ008S8 904 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms