RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 Q6ZNX1 250 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 ARHGAP36Q6ZRI8 547 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 FUNDC1Q8IVP5 155 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 DHRSXQ8N5I4 330 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 LEMD2Q8NC56 503 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 OR9I1Q8NGQ6 314 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 THAP11Q96EK4 314 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 TUBA1CQ9BQE3 449 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 SLC39A8Q9C0K1 460 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 SIK2Q9H0K1 926 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 MFSD1Q9H3U5 465 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 ALG9Q9H6U8 611 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 AKTIPQ9H8T0 292 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 TNFRSF12AQ9NP84 129 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 PKD2L2Q9NZM6 624 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 MYBPHLA2RUH7 354 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 AZIN1O14977 448 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 IDO1P14902 403 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 LBPP18428 481 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 CCT8P50990 548 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 CRYBB1P53674 252 aaPredicted RBP13.86□□□□□ -0.19
MKS1-201ENST00000313863 UNC50Q53HI1 259 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 CLEC6AQ6EIG7 209 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 CILP2Q8IUL8 1156 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 SLC15A3Q8IY34 581 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 TBC1D21Q8IYX1 336 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 SMG8Q8ND04 991 aaKnown RBP13.86□□□□□ -0.19
MKS1-201ENST00000313863 GRIN3AQ8TCU5 1115 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 FATE1Q969F0 183 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 DOK1Q99704 481 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 NPLQ9BXD5 320 aaPredicted RBP13.86□□□□□ -0.19
MKS1-201ENST00000313863 LIN28AQ9H9Z2 209 aaKnown RBP13.86□□□□□ -0.19
MKS1-201ENST00000313863 CXorf21Q9HAI6 301 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 POPDC3Q9HBV1 291 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 NEU3Q9UQ49 428 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 PCDHGA4Q9Y5G9 962 aa13.86□□□□□ -0.19
MKS1-201ENST00000313863 TTC24A2A3L6 582 aaPredicted RBP13.85□□□□□ -0.19
MKS1-201ENST00000313863 UBFD1O14562 309 aaKnown RBP13.85□□□□□ -0.19
MKS1-201ENST00000313863 PTGESO14684 152 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 SNAI1O95863 264 aaPredicted RBP13.85□□□□□ -0.19
MKS1-201ENST00000313863 IGLV3-25P01717 112 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 ALDOCP09972 364 aaKnown RBP13.85□□□□□ -0.19
MKS1-201ENST00000313863 DCKP27707 260 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 CCR1P32246 355 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 CAPGP40121 348 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 RENBPP51606 427 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 C16orf72Q14CZ0 275 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 GEN1Q17RS7 908 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 KDELC1Q6UW63 502 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 EFL1Q7Z2Z2 1120 aaKnown RBP13.85□□□□□ -0.19
MKS1-201ENST00000313863 RETREG3Q86VR2 466 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 SPPL2CQ8IUH8 684 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 DNAJB3Q8WWF6 145 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 HSPBAP1Q96EW2 488 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 ABHD16BQ9H3Z7 469 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 PFDN4Q9NQP4 134 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 SMPD3Q9NY59 655 aaPredicted RBP13.85□□□□□ -0.19
MKS1-201ENST00000313863 MAP10Q9P2G4 905 aa13.85□□□□□ -0.19
MKS1-201ENST00000313863 ADM5C9JUS6 153 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 AURKAO14965 403 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ARPC2O15144 300 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 IRAK2O43187 625 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 WISP3O95389 354 aaPredicted RBP13.84□□□□□ -0.19
MKS1-201ENST00000313863 GFAPP14136 432 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 CHRNA4P43681 627 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 SCNN1BP51168 640 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 GRIK2Q13002 908 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 SPIDRQ14159 915 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ZNF829Q3KNS6 432 aaPredicted RBP13.84□□□□□ -0.19
MKS1-201ENST00000313863 UGT3A2Q3SY77 523 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 MANEALQ5VSG8 457 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 AFMIDQ63HM1 303 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 TWF2Q6IBS0 349 aaKnown RBP13.84□□□□□ -0.19
MKS1-201ENST00000313863 ZNF280DQ6N043 979 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 SPATA19Q7Z5L4 167 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ISCA2Q86U28 154 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ADGRG5Q8IZF4 528 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ARRDC4Q8NCT1 418 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 OSCP1Q8WVF1 389 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 CYGBQ8WWM9 190 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 LRRC58Q96CX6 371 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 SLC39A3Q9BRY0 314 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 CCDC68Q9H2F9 335 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ATP13A1Q9HD20 1204 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 SDR39U1Q9NRG7 319 aaPredicted RBP13.84□□□□□ -0.19
MKS1-201ENST00000313863 ADARB2Q9NS39 739 aaKnown RBP13.84□□□□□ -0.19
MKS1-201ENST00000313863 INTS10Q9NVR2 710 aaKnown RBP13.84□□□□□ -0.19
MKS1-201ENST00000313863 EBF1Q9UH73 591 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 FADS3Q9Y5Q0 445 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 TLL2Q9Y6L7 1015 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ZFC3H1O60293 1989 aaKnown RBP13.84□□□□□ -0.19
MKS1-201ENST00000313863 PATJQ8NI35 1801 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ATP6AP2A0A1C7CYW4 349 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 DLGAP1O14490 977 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ATP6AP2O75787 350 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 F2P00734 622 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 ZNF12P17014 697 aa13.84□□□□□ -0.19
MKS1-201ENST00000313863 MRPL19P49406 292 aaKnown RBP13.84□□□□□ -0.19
MKS1-201ENST00000313863 ENTPD1P49961 510 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms