RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ZNF623O75123 536 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 TIMP1P01033 207 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CLCNKBP51801 687 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 PPP3CAQ08209 521 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 RBBP4Q09028 425 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 KLHL12Q53G59 568 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 COLEC12Q5KU26 742 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 WDR93Q6P2C0 686 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 STX12Q86Y82 276 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 HDDC3Q8N4P3 179 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 FNDC5Q8NAU1 212 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 DNAJC9Q8WXX5 260 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CSPG4P5Q96PW8 444 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 AGO1Q9UL18 857 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 TLR6Q9Y2C9 796 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 PI4KAP42356 2102 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 EFCAB10A6NFE3 127 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 STX16-NPEPL1H3BU86 382 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 STX16O14662 325 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ATMINO43313 823 aaPredicted RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 TSC22D2O75157 780 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 SOD2P04179 222 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CD44P16070 742 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CST5P28325 142 aaPredicted RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 MAGEA11P43364 429 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 FBXO38Q6PIJ6 1188 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 KLHL17Q6TDP4 642 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 PTAR1Q7Z6K3 402 aaPredicted RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 GALNT7Q86SF2 657 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 COL26A1Q96A83 441 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 C3orf14Q9HBI5 128 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CYP4F12Q9HCS2 524 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 TDRD6O60522 2096 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 TMEM120BA0PK00 339 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ACADSP16219 412 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CORO1AP31146 461 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 RPL4P36578 427 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 PBX3P40426 434 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 BCAP31P51572 246 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 DRG2P55039 364 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 RPP38P78345 283 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 RAET1GQ6H3X3 334 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF605Q86T29 641 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 DUSP9Q99956 384 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CAB39LQ9H9S4 337 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 HCN3Q9P1Z3 774 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNHIT2Q9UHR6 403 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 PHF11Q9UIL8 331 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 COL11A1P12107 1806 aaPredicted RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 PPP1R37O75864 691 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 FASP25445 335 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ATP6V0D1P61421 351 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 MYBPC1Q00872 1141 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 TARBP2Q15633 366 aaKnown RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF461Q8TAF7 563 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 SPATA20Q8TB22 786 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 Q96MT0 163 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 RAB11FIP5Q9BXF6 653 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 DSN1Q9H410 356 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 CFAP97Q9P2B7 532 aa8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 NUP214P35658 2090 aaPredicted RBP8.34□□□□□ -1.07
PCDHB1-201ENST00000306549 UBDO15205 165 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 BMP7P18075 431 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 LBX1P52954 281 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 CSHL1Q14406 222 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 CRY1Q16526 586 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 TMEM164Q5U3C3 297 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 NIPAL1Q6NVV3 410 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 WDR59Q6PJI9 974 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 GSPT2Q8IYD1 628 aaKnown RBP8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 OR10H5Q8NGA6 315 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 HCAR2Q8TDS4 363 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 TNFRSF25Q93038 417 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 NARS2Q96I59 477 aaKnown RBP8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 CDADC1Q9BWV3 514 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 ARL15Q9NXU5 204 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 SLC12A4Q9UP95 1085 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 ZNF780BQ9Y6R6 833 aa8.34□□□□□ -1.08
PCDHB1-201ENST00000306549 ANKRD63C9JTQ0 380 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 NEDD8-MDP1E9PL57 170 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 TSPAN3O60637 253 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 CCNA2P20248 432 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 GSTM5P46439 218 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 ZC3H12AQ5D1E8 599 aaKnown RBP8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 FAM183BPQ6ZVS7 135 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 PROSER1Q86XN7 944 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SYT12Q8IV01 421 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 SBF1O95248 1867 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 DYTNA2CJ06 578 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 VHLP40337 213 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 EPS8Q12929 822 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 POU6F1Q14863 301 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 UGCGQ16739 394 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 NDUFA9Q16795 377 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 ZSWIM7Q19AV6 140 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 EPC2Q52LR7 807 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 ARSHQ5FYA8 562 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 BRAT1Q6PJG6 821 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 LRRC55Q6ZSA7 311 aa8.33□□□□□ -1.08
PCDHB1-201ENST00000306549 PJA1Q8NG27 643 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms