RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 KCTD15Q96SI1 283 aaPredicted RBP7.9□□□□□ -1.14
TM4SF1-201ENST00000305366 HNRNPABQ99729 332 aaKnown RBP7.9□□□□□ -1.14
TM4SF1-201ENST00000305366 MIPEPQ99797 713 aa7.9□□□□□ -1.14
TM4SF1-201ENST00000305366 BTBD10Q9BSF8 475 aa7.9□□□□□ -1.14
TM4SF1-201ENST00000305366 DHX35Q9H5Z1 703 aaKnown RBP7.9□□□□□ -1.14
TM4SF1-201ENST00000305366 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.9□□□□□ -1.14
TM4SF1-201ENST00000305366 DTLQ9NZJ0 730 aa7.9□□□□□ -1.14
TM4SF1-201ENST00000305366 FZD10Q9ULW2 581 aa7.9□□□□□ -1.14
TM4SF1-201ENST00000305366 SCML2Q9UQR0 700 aa7.9□□□□□ -1.14
TM4SF1-201ENST00000305366 ZFHX4Q86UP3 3567 aa7.9□□□□□ -1.15
TM4SF1-201ENST00000305366 IGHV1OR15-9A0A0B4J2B8 117 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SLC12A8A0AV02 714 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 FAM92AA1XBS5 289 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 HMX2A2RU54 273 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 POM121CA8CG34 1229 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 XPO1O14980 1071 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 TSPAN3O60637 253 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 OPHN1O60890 802 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SNNO75324 88 aaPredicted RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 DAB1O75553 588 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 KLKB1P03952 638 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CISD3P0C7P0 127 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 GM2AP17900 193 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 TFE3P19532 575 aaPredicted RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CSRP1P21291 193 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 HSD3B2P26439 372 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SERPINB3P29508 390 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 GCKP35557 465 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 ARL4AP40617 200 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 MATKP42679 507 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 NIPAL4Q0D2K0 466 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 TEX44Q53QW1 395 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 LRRC8BQ6P9F7 803 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 KYAT3Q6YP21 454 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 FAM124AQ86V42 546 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 DENND1CQ8IV53 801 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CHCHD4Q8N4Q1 142 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 PNPLA1Q8N8W4 532 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 TFB1MQ8WVM0 346 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 HTR3CQ8WXA8 447 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SORCS1Q8WY21 1168 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 P2RY11Q96G91 374 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 OXNAD1Q96HP4 312 aaPredicted RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 ZNF570Q96NI8 536 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SIKE1Q9BRV8 207 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 NAT9Q9BTE0 207 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CADM1Q9BY67 442 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 DUSP16Q9BY84 665 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 WWP1Q9H0M0 922 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 DCLRE1BQ9H816 532 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 ARL8BQ9NVJ2 186 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 EVLQ9UI08 416 aaPredicted RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 LRRC42Q9Y546 428 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 STON1Q9Y6Q2 735 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CNOT1A5YKK6 2376 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 FCHO1O14526 889 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 LIN7AO14910 233 aaPredicted RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 GSC2O15499 205 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CACNG3O60359 315 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 ZNF217O75362 1048 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 STC2O76061 302 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 BPGMP07738 259 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SERPINF2P08697 491 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 MYL2P10916 166 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 VAV1P15498 845 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CORO1AP31146 461 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CLNS1AP54105 237 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 TMPRSS15P98073 1019 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 ZBTB16Q05516 673 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 BST1Q10588 318 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 TBCCQ15814 346 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 TSNAXIP1Q2TAA8 658 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SLC25A52Q3SY17 297 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SYCP2LQ5T4T6 812 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 TRMT10BQ6PF06 316 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SLC23A3Q6PIS1 610 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 MINDY1Q8N5J2 469 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CCDC185Q8N715 623 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CEP76Q8TAP6 659 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CLEC4CQ8WTT0 213 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 DDI1Q8WTU0 396 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 KCTD13Q8WZ19 329 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 NT5C3BQ969T7 300 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 MRGPRX1Q96LB2 322 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 NUDCD1Q96RS6 583 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 FERMT1Q9BQL6 677 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CIPCQ9C0C6 399 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 STN1Q9H668 368 aaKnown RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 DENND2DQ9H6A0 471 aaPredicted RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 RETREG1Q9H6L5 497 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 NKX1-2Q9UD57 310 aaPredicted RBP7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 KLK13Q9UKR3 277 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 CLEC4EQ9ULY5 219 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 MAD1L1Q9Y6D9 718 aa7.89□□□□□ -1.15
TM4SF1-201ENST00000305366 NUP210Q8TEM1 1887 aaPredicted RBP7.88□□□□□ -1.15
TM4SF1-201ENST00000305366 SDR42E2A6NKP2 422 aa7.88□□□□□ -1.15
TM4SF1-201ENST00000305366 MEI4A8MW99 385 aa7.88□□□□□ -1.15
TM4SF1-201ENST00000305366 CAPN14A8MX76 684 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms