RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ATP6AP1Q15904 470 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 BROXQ5VW32 411 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 NEPROQ6NW34 567 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 DSG4Q86SJ6 1040 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 ITIH5Q86UX2 942 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 ZDHHC17Q8IUH5 632 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 MIER2Q8N344 545 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 MFSD2AQ8NA29 543 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 TRPV3Q8NET8 790 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 ABHD11Q8NFV4 315 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 CCDC97Q96F63 343 aaPredicted RBP14.68□□□□□ -0.06
COL6A2-201ENST00000300527 MAELQ96JY0 434 aaKnown RBP14.68□□□□□ -0.06
COL6A2-201ENST00000300527 ARMC1Q9NVT9 282 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 SPATA7Q9P0W8 599 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 FAM32AQ9Y421 112 aaKnown RBP14.68□□□□□ -0.06
COL6A2-201ENST00000300527 CITO14578 2027 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 ZNF286BP0CG31 522 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 GSK3BP49841 420 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 DIO3P55073 304 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 FOXA1P55317 472 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 FAM117BQ6P1L5 589 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 R3HCC1LQ7Z5L2 792 aaKnown RBP14.68□□□□□ -0.06
COL6A2-201ENST00000300527 SLCO6A1Q86UG4 719 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 WNT8BQ93098 351 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 NSUN5Q96P11 429 aaKnown RBP14.68□□□□□ -0.06
COL6A2-201ENST00000300527 TBL1YQ9BQ87 522 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 CHID1Q9BWS9 393 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 HOXC10Q9NYD6 342 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 SLAMF8Q9P0V8 285 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 HACL1Q9UJ83 578 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 PSME2Q9UL46 239 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 LRRC37AA6NMS7 1700 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 OR51F1A6NGY5 319 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 A6NL46 340 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 RASAL1O95294 804 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 GFAPP14136 432 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 CCT8P50990 548 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 PFKFB4Q16877 469 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 TIGD2Q4W5G0 525 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 FKBP1CQ5VVH2 108 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 ANKRD13AQ8IZ07 590 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 HTRA1Q92743 480 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 GLMNQ92990 594 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 FAR2Q96K12 515 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 CSF3RQ99062 836 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 ULBP1Q9BZM6 244 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 NANOGQ9H9S0 305 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 MEAF6Q9HAF1 191 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 SEPT3Q9UH03 358 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 POU2F3Q9UKI9 436 aa14.68□□□□□ -0.06
COL6A2-201ENST00000300527 GNGT2O14610 69 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 DCLK1O15075 740 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 SULT1C4O75897 302 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 CYP2C8P10632 490 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 HADHAP40939 763 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 CLCQ05315 142 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 LAPTM5Q13571 262 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 MEP1AQ16819 746 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 PCID2Q5JVF3 399 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 INTS11Q5TA45 600 aaKnown RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 HS3ST5Q8IZT8 346 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 TRUB1Q8WWH5 349 aaKnown RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 UHRF1Q96T88 793 aaPredicted RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 NDEL1Q9GZM8 345 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 ALG2Q9H553 416 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 NOL6Q9H6R4 1146 aaKnown RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 SIAEQ9HAT2 523 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 NSMCE4AQ9NXX6 385 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 PGAP2Q9UHJ9 254 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 FNDC3AQ9Y2H6 1198 aaKnown RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 TIMM13Q9Y5L4 95 aaPredicted RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 CSADQ9Y600 493 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 USP17L7P0C7H9 530 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 KCNC1P48547 511 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 ACADVLP49748 655 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 TSPY1Q01534 308 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 ANKRD34AQ69YU3 496 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 FAM45BPQ6NSW5 357 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 DCLRE1AQ6PJP8 1040 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 CATSPERGQ6ZRH7 1159 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 PTGR2Q8N8N7 351 aaPredicted RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 FAM45AQ8TCE6 357 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 LRRC58Q96CX6 371 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 MIR1-1HGQ9H1L0 117 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 SMURF2Q9HAU4 748 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 PNMA8BQ9ULN7 279 aaPredicted RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 SNX5Q9Y5X3 404 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 COL2A1P02458 1487 aaPredicted RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 TTC24A2A3L6 582 aaPredicted RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 I6L893 689 aaPredicted RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 M0R3G1 203 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 INHBBP09529 407 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 LTA4HP09960 611 aaKnown RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 SLC6A2P23975 617 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 HPCAL1P37235 193 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 PLA2G16P53816 162 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 YWHAHQ04917 246 aaPredicted RBP14.67□□□□□ -0.06
COL6A2-201ENST00000300527 PYCR3Q53H96 274 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 DLK2Q6UY11 383 aa14.67□□□□□ -0.06
COL6A2-201ENST00000300527 CADM3Q8N126 398 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms