RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 IRF1P10914 325 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 CST5P28325 142 aaPredicted RBP13.62□□□□□ -0.23
CDH8-201ENST00000299345 RAD51Q06609 339 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 SLC30A9Q6PML9 568 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 RNF19BQ6ZMZ0 732 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 ISCA2Q86U28 154 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 DENND1CQ8IV53 801 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 LPCAT1Q8NF37 534 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 DBF4BQ8NFT6 615 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 C19orf60Q96EN9 201 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 DCUN1D1Q96GG9 259 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 ASB2Q96Q27 587 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 TRIM4Q9C037 500 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 MUC3BQ9H195 1237 aa13.62□□□□□ -0.23
CDH8-201ENST00000299345 A0A0D9SEW6 157 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 MROH6A6NGR9 719 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 ANGPT2O15123 496 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 ACSL4O60488 711 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 SIX3O95343 332 aaPredicted RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 CCNHP51946 323 aaPredicted RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 FBXO39Q8N4B4 442 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 TEX26Q8N6G2 289 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 OR4K2Q8NGD2 314 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 TRPC4APQ8TEL6 797 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 UTP6Q9NYH9 597 aaKnown RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 IGLV3-10A0A075B6K4 115 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 LOC285095A0A1B0GVY8 99 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 DRGXA6NNA5 263 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 UBXN8O00124 270 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 NR5A2O00482 541 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 NRP2O60462 931 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 CHEK2O96017 543 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 EPOP01588 193 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 ATXN1LP0C7T5 689 aaKnown RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 MS4A2Q01362 244 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 RING1Q06587 406 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 ZNF678Q5SXM1 525 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 OR52E8Q6IFG1 317 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 CYP2R1Q6VVX0 501 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 RNF111Q6ZNA4 994 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 ANKS3Q6ZW76 656 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 STAG3L4Q8TBR4 150 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 FATE1Q969F0 183 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 CDKN2AIPNLQ96HQ2 116 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 BTBD9Q96Q07 612 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 UNC93B1Q9H1C4 597 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 MAGEH1Q9H213 219 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 SPAG4Q9NPE6 437 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 RNF186Q9NXI6 227 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 ZFP37Q9Y6Q3 630 aaPredicted RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 TSC2P49815 1807 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 NCF1BA6NI72 391 aaPredicted RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 TMEM88BA6NKF7 163 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 TBKBP1A7MCY6 615 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 NCF1CA8MVU1 366 aaPredicted RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 SNX2O60749 519 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 NCF1P14598 390 aaPredicted RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 HDCP19113 662 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 GATMP50440 423 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 RPS24P62847 133 aaKnown RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 HERVK_113P63132 956 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 RFTN1Q14699 578 aaPredicted RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 REP15Q6BDI9 236 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 LRRC8DQ7L1W4 858 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 CDK5RAP1Q96SZ6 601 aaKnown RBP13.61□□□□□ -0.23
CDH8-201ENST00000299345 ERVK-6Q9BXR3 956 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 FAM192AQ9GZU8 254 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 MEAF6Q9HAF1 191 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 PFDN4Q9NQP4 134 aa13.61□□□□□ -0.23
CDH8-201ENST00000299345 E5RI56 91 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 E7ENX8 843 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 AZIN1O14977 448 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 STX7O15400 261 aaKnown RBP13.6□□□□□ -0.23
CDH8-201ENST00000299345 PEX1O43933 1283 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 TSPAN3O60637 253 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 RALGDSQ12967 914 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 ZRANB3Q5FWF4 1079 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 TAS2R42Q7RTR8 314 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 PBXIP1Q96AQ6 731 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 MAELQ96JY0 434 aaKnown RBP13.6□□□□□ -0.23
CDH8-201ENST00000299345 CNBD2Q96M20 576 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 TRAPPC9Q96Q05 1148 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 TTPALQ9BTX7 342 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 FBRSL1Q9HCM7 1045 aaKnown RBP13.6□□□□□ -0.23
CDH8-201ENST00000299345 SLC38A8A6NNN8 435 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 BCAS2O75934 225 aaPredicted RBP13.6□□□□□ -0.23
CDH8-201ENST00000299345 CALRP27797 417 aaKnown RBP13.6□□□□□ -0.23
CDH8-201ENST00000299345 SLC11A1P49279 550 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 CHN2P52757 468 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 SMARCB1Q12824 385 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 ADGRE1Q14246 886 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 TRIM25Q14258 630 aaKnown RBP13.6□□□□□ -0.23
CDH8-201ENST00000299345 PTPRNQ16849 979 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 SAMD4BQ5PRF9 694 aaKnown RBP13.6□□□□□ -0.23
CDH8-201ENST00000299345 ANKS6Q68DC2 871 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 PRSS55Q6UWB4 352 aaPredicted RBP13.6□□□□□ -0.23
CDH8-201ENST00000299345 ZNF683Q8IZ20 524 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 OR9I1Q8NGQ6 314 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 STON2Q8WXE9 905 aa13.6□□□□□ -0.23
CDH8-201ENST00000299345 PCDHAC1Q9H158 963 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms