RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 OR7G1Q8NGA0 311 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TBCKQ8TEA7 893 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SERPINB11Q96P15 392 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TWNKQ96RR1 684 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 POTEKPQ9BYX7 375 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF408Q9H9D4 720 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NEMP1O14524 444 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CST8O60676 142 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SLC2A2P11168 524 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CDKN2CP42773 168 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 OGDHQ02218 1023 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ALDH6A1Q02252 535 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ACOX1Q15067 660 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 LRRC38Q5VT99 294 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 C1orf94Q6P1W5 598 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 OTUB2Q96DC9 234 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SIPA1Q96FS4 1042 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PELOQ9BRX2 385 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ZMAT5Q9UDW3 170 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PACSIN3Q9UKS6 424 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 C14orf166Q9Y224 244 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CPDO75976 1380 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 KDM4BO94953 1096 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CCNB1P14635 433 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 RASGEF1BQ0VAM2 473 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TCIRG1Q13488 830 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PLA2G4EQ3MJ16 856 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ANKS6Q68DC2 871 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PTRHD1Q6GMV3 140 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 GDPGP1Q6ZNW5 385 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF720Q7Z2F6 126 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF615Q8N8J6 731 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CLIC6Q96NY7 704 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ADAMTS10Q9H324 1103 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TBC1D13Q9NVG8 400 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 A0A0G2JMP0 313 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TTLL8A6PVC2 850 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CASC3O15234 703 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 AVILO75366 819 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CCNDBP1O95273 360 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 XRCC1P18887 633 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 DPYDQ12882 1025 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 HACD4Q5VWC8 232 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF790Q6PG37 636 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 OXR1Q8N573 874 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 UXS1Q8NBZ7 420 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SEMA6DQ8NFY4 1073 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 OR4M2Q8NGB6 313 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PLEKHF1Q96S99 279 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 EBNA1BP2Q99848 306 aaKnown RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 BARHL2Q9NY43 387 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 LIMD1Q9UGP4 676 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF521Q96K83 1311 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 MEN1O00255 615 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 POLR1CO15160 346 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SAGP10523 405 aaPredicted RBP4.85□□□□□ -1.63
CSMD3-201ENST00000297405 HSD3B1P14060 373 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 ECHS1P30084 290 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 GRIA3P42263 894 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 GPR15P49685 360 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 SMARCB1Q12824 385 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 MAPKAPK3Q16644 382 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NRF1Q16656 503 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 LYPLAL1Q5VWZ2 237 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 TATDN1Q6P1N9 297 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 CEP97Q8IW35 865 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 FEZF2Q8TBJ5 459 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 PPP1R13LQ8WUF5 828 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 RPS6KB2Q9UBS0 482 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 RAP2CQ9Y3L5 183 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 NUP98P52948 1817 aa4.85□□□□□ -1.63
CSMD3-201ENST00000297405 E2F8A0AVK6 867 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 DDX3YO15523 660 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 DCXO43602 365 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 GMDSO60547 372 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 COQ9O75208 318 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 ZDHHC11BP0C7U3 371 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HPGDP15428 266 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 SLC6A2P23975 617 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 TAS2R43P59537 309 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 TAS2R31P59538 309 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 MYBPC1Q00872 1141 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CUL2Q13617 745 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 LSM12Q3MHD2 195 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 FAM198BQ6UWH4 519 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 CHST15Q7LFX5 561 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 RIOX2Q8IUF8 465 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 OFCC1Q8IZS5 231 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 SPATA22Q8NHS9 363 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 C3orf49Q96BT1 292 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 C8orf48Q96LL4 319 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 STRBPQ96SI9 672 aaKnown RBP4.84□□□□□ -1.63
CSMD3-201ENST00000297405 NELFAQ9H3P2 528 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 HPF1Q9NWY4 346 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 TRPC4Q9UBN4 977 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 DNPEPQ9ULA0 475 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 EMILIN1Q9Y6C2 1016 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 BORCS7-ASMTA0A0B4J1R7 106 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 TGOLN2O43493 480 aa4.84□□□□□ -1.63
CSMD3-201ENST00000297405 RSL1D1O76021 490 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms