RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 HTR3CQ8WXA8 447 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 NUS1Q96E22 293 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 COQ10AQ96MF6 247 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 KCTD15Q96SI1 283 aaPredicted RBP16■□□□□ 0.15
TMEM41A-201ENST00000296254 NUDT22Q9BRQ3 303 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 CARS2Q9HA77 564 aaKnown RBP16■□□□□ 0.15
TMEM41A-201ENST00000296254 SPATS2LQ9NUQ6 558 aaKnown RBP16■□□□□ 0.15
TMEM41A-201ENST00000296254 FANCLQ9NW38 375 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 CHMP5Q9NZZ3 219 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 MOSPD1Q9UJG1 213 aa16■□□□□ 0.15
TMEM41A-201ENST00000296254 SPENQ96T58 3664 aaKnown RBP15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 A8MX80 341 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 HGSO14964 777 aaPredicted RBP15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 TEX33O43247 280 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 SOCS5O75159 536 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 ATXN8OSP0DMR3 200 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 SFTPCP11686 197 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 SCNN1BP51168 640 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 NFKB2Q00653 900 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 ILF3Q12906 894 aaKnown RBP eCLIP15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 CNGA3Q16281 694 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 CLPPQ16740 277 aaPredicted RBP15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 TMCO4Q5TGY1 634 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 TMEM164Q5U3C3 297 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 CYP4V2Q6ZWL3 525 aaPredicted RBP15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 PIM3Q86V86 326 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 NRROSQ86YC3 692 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 ARFGAP1Q8N6T3 406 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 ZSCAN1Q8NBB4 408 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 ZDHHC1Q8WTX9 485 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 ERGIC2Q96RQ1 377 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 SEMA3CQ99985 751 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 SYT11Q9BT88 431 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 GSDMCQ9BYG8 508 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 PHPT1Q9NRX4 125 aaPredicted RBP15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 TRNAU1APQ9NX07 287 aaKnown RBP15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 TAS2R14Q9NYV8 317 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 AKAP7Q9P0M2 348 aaPredicted RBP15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 TAAR2Q9P1P5 351 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 SEPT3Q9UH03 358 aa15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 LIMA1Q9UHB6 759 aaKnown RBP15.99■□□□□ 0.15
TMEM41A-201ENST00000296254 STMND1H3BQB6 276 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 DAPK3O43293 454 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 ATMINO43313 823 aaPredicted RBP15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 HTRA2O43464 458 aaPredicted RBP15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 B4GAT1O43505 415 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 FGF1P05230 155 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 CEACAM5P06731 702 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 CCL4P13236 92 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 OR1D5P58170 312 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 UBXN1Q04323 297 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 LBRQ14739 615 aaKnown RBP15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 TBR1Q16650 682 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 AMZ1Q400G9 498 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 PPP6R3Q5H9R7 873 aaPredicted RBP15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 ERMARDQ5T6L9 678 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 PLEKHA7Q6IQ23 1121 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 ATG14Q6ZNE5 492 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 RCBTB1Q8NDN9 531 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 ANKRD20A12PQ8NF67 263 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 DTD2Q96FN9 168 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 FUCA2Q9BTY2 467 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 TEX101Q9BY14 249 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 FRMD8Q9BZ67 464 aaPredicted RBP15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 SUDS3Q9H7L9 328 aaPredicted RBP15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 PARVAQ9NVD7 372 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 KCTD5Q9NXV2 234 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 IL17BQ9UHF5 180 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 PCSK1NQ9UHG2 260 aa15.98■□□□□ 0.15
TMEM41A-201ENST00000296254 SDK2Q58EX2 2172 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 IGHV5-10-1A0A0J9YXX1 117 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 A0A1W2PQ67 120 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 RHPN2P1A8MT19 583 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 SUV39H1O43463 412 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 HEXIM1O94992 359 aaKnown RBP15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 ECEL1O95672 775 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 FUCA1P04066 466 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 CCDC172P0C7W6 258 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 FERP16591 822 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 CR2P20023 1033 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 LHCGRP22888 699 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 ALDH4A1P30038 563 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 VIPR1P32241 457 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 RENBPP51606 427 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 ARSDP51689 593 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 ZNF135P52742 658 aaPredicted RBP15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 CYP4F2P78329 520 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 CDK3Q00526 305 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 SLC10A7Q0GE19 358 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 DPYSQ14117 519 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 PPP1R2P3Q6NXS1 205 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 ZNF574Q6ZN55 896 aaPredicted RBP15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 RBM43Q6ZSC3 357 aaKnown RBP15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 PSTKQ8IV42 348 aaKnown RBP15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 TP53INP2Q8IXH6 220 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 FNIP1Q8TF40 1166 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 PMEPA1Q969W9 287 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 CCDC74BQ96LY2 380 aa15.97■□□□□ 0.15
TMEM41A-201ENST00000296254 ZNF599Q96NL3 588 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms