RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 KYNUQ16719 465 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 UBAP2Q5T6F2 1119 aaKnown RBP17.81■□□□□ 0.44
CCDC78-201ENST00000293889 GLT6D1Q7Z4J2 308 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 SPEM1Q8N4L4 309 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 HDDC3Q8N4P3 179 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 SIPA1Q96FS4 1042 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 CFAP36Q96G28 342 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 ZNF778Q96MU6 729 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 PLAC1Q9HBJ0 212 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 POLMQ9NP87 494 aaPredicted RBP17.81■□□□□ 0.44
CCDC78-201ENST00000293889 HACD3Q9P035 362 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 B4GALT6Q9UBX8 382 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 SERGEFQ9UGK8 458 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 ZC3H7BQ9UGR2 993 aaKnown RBP17.81■□□□□ 0.44
CCDC78-201ENST00000293889 ZNF711Q9Y462 761 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 KCTD3Q9Y597 815 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 ARL5AQ9Y689 179 aa17.81■□□□□ 0.44
CCDC78-201ENST00000293889 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.81■□□□□ 0.44
CCDC78-201ENST00000293889 MROH6A6NGR9 719 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 SPINT1O43278 529 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 DNTTP04053 509 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 MYZAPP0CAP1 466 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 GABRG2P18507 467 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 PGAM1P18669 254 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 LSP1P33241 339 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 EIF3BP55884 814 aaKnown RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 ZBTB16Q05516 673 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 ZNF844Q08AG5 666 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 TAF1AQ15573 450 aaPredicted RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 CEP85LQ5SZL2 805 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 PIP5KL1Q5T9C9 394 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 CRTC1Q6UUV9 634 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 CES3Q6UWW8 571 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 LYSMD3Q7Z3D4 306 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 TSPAN33Q86UF1 283 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 PALM2Q8IXS6 379 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 TTC30BQ8N4P2 665 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 PTCD2Q8WV60 388 aaKnown RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 HMGB4Q8WW32 186 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 EID2BQ96D98 161 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 SRPK1Q96SB4 655 aaKnown RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 NAT9Q9BTE0 207 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 TRABDQ9H4I3 376 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 MRM3Q9HC36 420 aaKnown RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 LRRC4CQ9HCJ2 640 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 SPATA6Q9NWH7 488 aaPredicted RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 FAM237BA0A1B0GVD1 139 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 A0A1W2PP55 124 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 GOLGA6L10A6NI86 522 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 BUD23O43709 281 aaKnown RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 RNASEH2AO75792 299 aaKnown RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 CRTAMO95727 393 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 LHCGRP22888 699 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 NMBRP28336 390 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 VIPR1P32241 457 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 CCT5P48643 541 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 SUOXP51687 545 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 PTPRCAPQ14761 206 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 AGBL4Q5VU57 503 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 ARMC3Q5W041 872 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 ERAP2Q6P179 960 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 KIAA1324Q6UXG2 1013 aaKnown RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 MAMSTRQ6ZN01 415 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 UNC5AQ6ZN44 842 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 CAPN12Q6ZSI9 719 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 TRMT10CQ7L0Y3 403 aaKnown RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 DPPA4Q7L190 304 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 TMEM135Q86UB9 458 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 CCNJLQ8IV13 435 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 C10orf67Q8IYJ2 551 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 MAML2Q8IZL2 1156 aaPredicted RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 MFSD3Q96ES6 412 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 FCRL3Q96P31 734 aaPredicted RBP17.8■□□□□ 0.44
CCDC78-201ENST00000293889 OMDQ99983 421 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 IER2Q9BTL4 223 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 GPR63Q9BZJ6 419 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 FBXL12Q9NXK8 326 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 SCML1Q9UN30 329 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 ITM2BQ9Y287 266 aa17.8■□□□□ 0.44
CCDC78-201ENST00000293889 C1orf232A0A0U1RR37 186 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 C2orf81A6NN90 581 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 AREL1O15033 823 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 CLDN7O95471 211 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 TTC4O95801 387 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 SLC4A1P02730 911 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 CYP2A6P11509 494 aaPredicted RBP17.79■□□□□ 0.44
CCDC78-201ENST00000293889 NFKBIAP25963 317 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 SSTR1P30872 391 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 MMP12P39900 470 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 GPX6P59796 221 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 LAMB3Q13751 1172 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 ANKRD20A4Q4UJ75 823 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 TSTD2Q5T7W7 516 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 STEAP4Q687X5 459 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 LRRC66Q68CR7 880 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 NLRP9Q7RTR0 991 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 YTHDF3Q7Z739 585 aaKnown RBP17.79■□□□□ 0.44
CCDC78-201ENST00000293889 C1orf210Q8IVY1 113 aa17.79■□□□□ 0.44
CCDC78-201ENST00000293889 TSTD1Q8NFU3 115 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms