RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 GAS2L3Q86XJ1 694 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 DCP2Q8IU60 420 aaKnown RBP9.8□□□□□ -0.84
CCDC58-201ENST00000291458 CCDC50Q8IVM0 306 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 CCDC13Q8IYE1 715 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 GALNT15Q8N3T1 639 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 PLD5Q8N7P1 536 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 FAM174AQ8TBP5 190 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 FAM71BQ8TC56 605 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 ECHDC3Q96DC8 303 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 IL12RB2Q99665 862 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 APOOQ9BUR5 198 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 MAK16Q9BXY0 300 aaKnown RBP9.8□□□□□ -0.84
CCDC58-201ENST00000291458 POLR1EQ9GZS1 481 aaKnown RBP9.8□□□□□ -0.84
CCDC58-201ENST00000291458 BRD8Q9H0E9 1235 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 MRPL40Q9NQ50 206 aaKnown RBP9.8□□□□□ -0.84
CCDC58-201ENST00000291458 NLGN3Q9NZ94 848 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 DTLQ9NZJ0 730 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 SPASTQ9UBP0 616 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 CHKBQ9Y259 395 aa9.8□□□□□ -0.84
CCDC58-201ENST00000291458 LY6G6EA0A0G2JKS1 128 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 MACROD2A1Z1Q3 448 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 NEMP2A6NFY4 417 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 AGRPO00253 132 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 CACNB4O00305 520 aaPredicted RBP9.79□□□□□ -0.84
CCDC58-201ENST00000291458 DKK1O94907 266 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 HEXIM1O94992 359 aaKnown RBP9.79□□□□□ -0.84
CCDC58-201ENST00000291458 JCHAINP01591 159 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 GIMD1P0DJR0 217 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 CYP2A6P11509 494 aaPredicted RBP9.79□□□□□ -0.84
CCDC58-201ENST00000291458 KRT10P13645 584 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 CCNB1P14635 433 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 TSHRP16473 764 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 GM2AP17900 193 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 HTR1BP28222 390 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 CYLC1P35663 651 aaPredicted RBP9.79□□□□□ -0.84
CCDC58-201ENST00000291458 CD86P42081 329 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 NAP1L1P55209 391 aaKnown RBP9.79□□□□□ -0.84
CCDC58-201ENST00000291458 POLR2LP62875 67 aaKnown RBP9.79□□□□□ -0.84
CCDC58-201ENST00000291458 CYP4F3Q08477 520 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 NSUN2Q08J23 767 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCDC58-201ENST00000291458 NIPAL4Q0D2K0 466 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 SPA17Q15506 151 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 PCSK7Q16549 785 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 GUSBP11Q6P575 273 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 MFSD7Q6UXD7 560 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 RFLNAQ6ZTI6 216 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 USP45Q70EL2 814 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 EFL1Q7Z2Z2 1120 aaKnown RBP9.79□□□□□ -0.84
CCDC58-201ENST00000291458 KDELC2Q7Z4H8 507 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 HSD11B1LQ7Z5J1 315 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 TRIM74Q86UV6 250 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 RHOT1Q8IXI2 618 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 KYQ8NBH2 561 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 SPC24Q8NBT2 197 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 ACRBPQ8NEB7 543 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 IFI44Q8TCB0 444 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 HCAR2Q8TDS4 363 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 ASB12Q8WXK4 309 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 OR1E3Q8WZA6 343 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 FAF2Q96CS3 445 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 WDR92Q96MX6 357 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 RNF157Q96PX1 679 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 CLPBQ9H078 707 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 CCDC86Q9H6F5 360 aaKnown RBP9.79□□□□□ -0.84
CCDC58-201ENST00000291458 WDR26Q9H7D7 661 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 GULP1Q9UBP9 304 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 LCMT1Q9UIC8 334 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 FKBPLQ9UIM3 349 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 PCDHGA1Q9Y5H4 931 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 U3KQA8 63 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 IGF2RP11717 2491 aa9.79□□□□□ -0.84
CCDC58-201ENST00000291458 TMEM8BA6NDV4 472 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 TRABD2BA6NFA1 517 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 C3orf70A6NLC5 250 aaPredicted RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 SRRM3A6NNA2 597 aaPredicted RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 B4DGG1 531 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 MATN3O15232 486 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 CASC3O15234 703 aaKnown RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 HTRA2O43464 458 aaPredicted RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 MTA2O94776 668 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 PIRTP0C851 137 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 MX2P20592 715 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 ACP1P24666 158 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 ARHGAP25P42331 645 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 SRP54P61011 504 aaKnown RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 YPEL5P62699 121 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 INSM1Q01101 510 aaPredicted RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 TARDBPQ13148 414 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 MTM1Q13496 603 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 GALNT3Q14435 633 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 NR0B2Q15466 257 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 SMAD1Q15797 465 aaKnown RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 LINC01559Q495D7 138 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 PERM1Q5SV97 790 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 LRRC66Q68CR7 880 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 ZCCHC8Q6NZY4 707 aaKnown RBP9.78□□□□□ -0.84
CCDC58-201ENST00000291458 HEATR4Q86WZ0 1026 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 SLC35F3Q8IY50 421 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 MAPK15Q8TD08 544 aa9.78□□□□□ -0.84
CCDC58-201ENST00000291458 BTN2A2Q8WVV5 523 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms