RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 VWA7Q9Y334 891 aa20.39■□□□□ 0.86
TMED4-201ENST00000289577 PTCH2Q9Y6C5 1203 aa20.39■□□□□ 0.86
TMED4-201ENST00000289577 SMIM35A0A1B0GVV1 85 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 PTGESO14684 152 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 FGF4P08620 206 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 SLC6A2P23975 617 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 HOXC13P31276 330 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 RAB15P59190 212 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 HERVK_113P63132 956 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 SFSWAPQ12872 951 aaKnown RBP20.39■□□□□ 0.85
TMED4-201ENST00000289577 KIF19Q2TAC6 998 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 TMTC4Q5T4D3 741 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 PHYKPLQ8IUZ5 450 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 SENP8Q96LD8 212 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 ERVK-6Q9BXR3 956 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 ALG9Q9H6U8 611 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 IL1RL2Q9HB29 575 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 RBM22Q9NW64 420 aaKnown RBP eCLIP20.39■□□□□ 0.856e-7■■■■□ 20.6
TMED4-201ENST00000289577 EGFL7Q9UHF1 273 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 OAZ3Q9UMX2 235 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 DNAJC15Q9Y5T4 150 aa20.39■□□□□ 0.85
TMED4-201ENST00000289577 RNF103-CHMP3A0A140T963 221 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 CLASP2O75122 1294 aaKnown RBP20.38■□□□□ 0.85
TMED4-201ENST00000289577 MATN4O95460 622 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 GPIP06744 558 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 OXTRP30559 389 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 MAGEA8P43361 318 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 SLC5A3P53794 718 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 EIF4EBP2Q13542 120 aaPredicted RBP20.38■□□□□ 0.85
TMED4-201ENST00000289577 SNX17Q15036 470 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 ANKDD1AQ495B1 522 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 VPS26BQ4G0F5 336 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 ARTNQ5T4W7 220 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 FASTKD5Q7L8L6 764 aaKnown RBP20.38■□□□□ 0.85
TMED4-201ENST00000289577 ZNF354CQ86Y25 554 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 MIER2Q8N344 545 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 RNF34Q969K3 372 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 PPP1R10Q96QC0 940 aaKnown RBP20.38■□□□□ 0.85
TMED4-201ENST00000289577 TDRKHQ9Y2W6 561 aaKnown RBP20.38■□□□□ 0.85
TMED4-201ENST00000289577 SH3GLB1Q9Y371 365 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 TMX2-CTNND1H3BSU7 103 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 ARPC2O15144 300 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 CLOCKO15516 846 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 SNAI1O95863 264 aaPredicted RBP20.38■□□□□ 0.85
TMED4-201ENST00000289577 IGLV3-25P01717 112 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 INHBBP09529 407 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 SMPD1P17405 629 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 LHX1P48742 406 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 SH3BP2P78314 561 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 FOXM1Q08050 763 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 RAB39AQ14964 217 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 ZNF829Q3KNS6 432 aaPredicted RBP20.38■□□□□ 0.85
TMED4-201ENST00000289577 COQ5Q5HYK3 327 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 KDELC1Q6UW63 502 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 ABRAXAS1Q6UWZ7 409 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 KDELC2Q7Z4H8 507 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 CILP2Q8IUL8 1156 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 ANKRD13AQ8IZ07 590 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 GABPB2Q8TAK5 448 aaPredicted RBP20.38■□□□□ 0.85
TMED4-201ENST00000289577 DQX1Q8TE96 717 aaKnown RBP20.38■□□□□ 0.85
TMED4-201ENST00000289577 BORCS5Q969J3 196 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 HDAC10Q969S8 669 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 FBXL20Q96IG2 436 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 CYP2S1Q96SQ9 504 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 SLC52A3Q9NQ40 469 aa20.38■□□□□ 0.85
TMED4-201ENST00000289577 MBLAC1A4D2B0 266 aaPredicted RBP20.37■□□□□ 0.85
TMED4-201ENST00000289577 ANGPT2O15123 496 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 CBFA2T3O75081 653 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 SEC24DO94855 1032 aaPredicted RBP20.37■□□□□ 0.85
TMED4-201ENST00000289577 FCGR1AP12314 374 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 GFAPP14136 432 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 VARSP26640 1264 aaKnown RBP20.37■□□□□ 0.85
TMED4-201ENST00000289577 CD97P48960 835 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 CDKN2DP55273 166 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 WNT3AP56704 352 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 YBX1P67809 324 aaKnown RBP20.37■□□□□ 0.85
TMED4-201ENST00000289577 NOMO2Q5JPE7 1267 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 GPR158Q5T848 1215 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 MANEALQ5VSG8 457 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 TBC1D15Q8TC07 691 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 GIPC3Q8TF64 312 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 LRRC58Q96CX6 371 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 VPS50Q96JG6 964 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 SIK2Q9H0K1 926 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 ATP13A1Q9HD20 1204 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 GID8Q9NWU2 228 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 PCDHA9Q9Y5H5 950 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 FADS3Q9Y5Q0 445 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 DYTNA2CJ06 578 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 FGF10O15520 208 aaPredicted RBP20.37■□□□□ 0.85
TMED4-201ENST00000289577 TPST1O60507 370 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 CDK14O94921 469 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 PAPSS2O95340 614 aaPredicted RBP20.37■□□□□ 0.85
TMED4-201ENST00000289577 CAPGP40121 348 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 DUSP28Q4G0W2 176 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 AFMIDQ63HM1 303 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 TIGD7Q6NT04 549 aaPredicted RBP20.37■□□□□ 0.85
TMED4-201ENST00000289577 TMEM86AQ8N2M4 240 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 OR13J1Q8NGT2 312 aa20.37■□□□□ 0.85
TMED4-201ENST00000289577 CYGBQ8WWM9 190 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms