RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 NOL11Q9H8H0 719 aaKnown RBP12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 FANCEQ9HB96 536 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 ANAPC2Q9UJX6 822 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 ADAM28Q9UKQ2 775 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 CARD8Q9Y2G2 431 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 ANKRD6Q9Y2G4 727 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 C9IYK1 514 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 STBD1O95210 358 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 MLNP12872 115 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 RECQLP46063 649 aaPredicted RBP12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 GJA9P57773 515 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC18A2Q05940 514 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 ARHGAP36Q6ZRI8 547 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 TAC4Q86UU9 113 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 RELL1Q8IUW5 271 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 CARNMT1Q8N4J0 409 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 DQX1Q8TE96 717 aaKnown RBP12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 PROX1Q92786 737 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 GLT1D1Q96MS3 346 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 APOL4Q9BPW4 351 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 FTHL17Q9BXU8 183 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 GLOD4Q9HC38 313 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 WWOXQ9NZC7 414 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 MARCH2Q9P0N8 246 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 NRP1O14786 923 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 SH3BGRLO75368 114 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 KLHL18O94889 574 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC7A2P52569 658 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 CDC16Q13042 620 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 PSMD5Q16401 504 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 TTC23Q5W5X9 447 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 PRMT9Q6P2P2 845 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 TTC23LQ6PF05 361 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 HS6ST3Q8IZP7 471 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 PLD6Q8N2A8 252 aaKnown RBP12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 FBXO27Q8NI29 283 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 SERPINB11Q96P15 392 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 SYTL2Q9HCH5 934 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 PTTG2Q9NZH5 202 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 TRPV2Q9Y5S1 764 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 GLI3P10071 1580 aa12.58□□□□□ -0.4
SLC6A1-201ENST00000287766 TIPRLO75663 272 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CPSF4O95639 269 aaKnown RBP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 FGFR1P11362 822 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 PSEN1P49768 467 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CACHD1Q5VU97 1274 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 SLCO6A1Q86UG4 719 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 PANX3Q96QZ0 392 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 ABCC13Q9NSE7 274 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 FETUBQ9UGM5 382 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 LNPEPQ9UIQ6 1025 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CRLS1Q9UJA2 301 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CDH9Q9ULB4 789 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 DUSP12Q9UNI6 340 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 A0A0G2JLL6 359 aaPredicted RBP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 MOXD2PA6NHM9 499 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 NT5C1B-RDH14C9J2C7 533 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 S100A9P06702 114 aaKnown RBP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 LINC00032P0C843 101 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 TAS2R39P59534 338 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 VEPH1Q14D04 833 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 TRIM71Q2Q1W2 868 aaKnown RBP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 FRMD7Q6ZUT3 714 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 PRRT2Q7Z6L0 340 aaPredicted RBP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CIR1Q86X95 450 aaPredicted RBP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 HIPK1Q86Z02 1210 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC22A9Q8IVM8 553 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 TMEM86AQ8N2M4 240 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 SETD9Q8NE22 299 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 HSPBAP1Q96EW2 488 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 PPP1R2P1Q96PQ5 205 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 HBEGFQ99075 208 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 KLHL31Q9H511 634 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 LMCD1Q9NZU5 365 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 DOCK2Q92608 1830 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 FAM159BA6NKW6 160 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 TRIM64CA6NLI5 447 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 SYNCRIPO60506 623 aaKnown RBP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 PDE9AO76083 593 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CDH5P33151 784 aaPredicted RBP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 GRK3P35626 688 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 SLC11A2P49281 568 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CYP4F2P78329 520 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CYP4F3Q08477 520 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 ZNF846Q147U1 533 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 C16orf62Q7Z3J2 963 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 LZTR1Q8N653 840 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 ATAD1Q8NBU5 361 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 RAET1EQ8TD07 263 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CXorf21Q9HAI6 301 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 SCUBE2Q9NQ36 999 aa12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 TRMT13Q9NUP7 481 aaKnown RBP12.57□□□□□ -0.4
SLC6A1-201ENST00000287766 CCDC189A1A4V9 331 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 RHOCP08134 193 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 DNAJB2P25686 324 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 RGS4P49798 205 aa12.56□□□□□ -0.4
SLC6A1-201ENST00000287766 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms