RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PCID2Q5JVF3 399 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 EIF5AL1Q6IS14 154 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 FRRS1Q6ZNA5 592 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PLEKHH3Q7Z736 793 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 YTHDF3Q7Z739 585 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 HM13Q8TCT9 377 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 MARK4Q96L34 752 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PLA2G12BQ9BX93 195 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 ZNF70Q9UC06 446 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 ELP6Q0PNE2 266 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 ALG10Q5BKT4 473 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 SIRT2Q8IXJ6 389 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 KATNAL2Q8IYT4 538 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 BRD9Q9H8M2 597 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CLIC5Q9NZA1 410 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 ABCG2Q9UNQ0 655 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 RNF17Q9BXT8 1623 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 AP5Z1O43299 807 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 TPD52L2O43399 206 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 AP2A2O94973 939 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 KAT7O95251 611 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 TRBC1P01850 177 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 GLI1P08151 1106 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 ADRA1DP25100 572 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 RBM34P42696 430 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CCR3P51677 355 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 FAM153CQ494X1 144 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 EPHA10Q5JZY3 1008 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 GCNT6Q5T4J0 391 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CACUL1Q86Y37 369 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PIGXQ8TBF5 258 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 C5orf34Q96MH7 638 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PHF12Q96QT6 1004 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 SEMA4AQ9H3S1 761 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 SLC22A3O75751 556 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PECAM1P16284 738 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 RNASE12Q5GAN4 147 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 RBM20Q5T481 1227 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 LIPMQ5VYY2 423 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 TMCO6Q96DC7 493 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 FAM84BQ96KN1 310 aaPredicted RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 HIST1H2AAQ96QV6 131 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 POPDC2Q9HBU9 364 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 IKZF2Q9UKS7 526 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PMF1-BGLAPU3KQ54 211 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 BPNT1O95861 308 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 RLN2P04090 185 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 HGFP14210 728 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 GRIA4P48058 902 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 ATP6V0D1P61421 351 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 HSPA14Q0VDF9 509 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 FAAP100Q0VG06 881 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CDKL4Q5MAI5 379 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 DNAJB14Q8TBM8 379 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 IGDCC4Q8TDY8 1250 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CEP41Q9BYV8 373 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 DDX43Q9NXZ2 648 aaKnown RBP8.74□□□□□ -1.01
NIPBL-201ENST00000282516 PHF24Q9UPV7 400 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 CAPN6Q9Y6Q1 641 aa8.74□□□□□ -1.01
NIPBL-201ENST00000282516 KANTRA0A1W2PQU2 76 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 SETD6Q8TBK2 473 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 S100PBPQ96BU1 408 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 SIPA1Q96FS4 1042 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 DHRS1Q96LJ7 313 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 XKR8Q9H6D3 395 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 FKBP7Q9Y680 259 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 UMODL1Q5DID0 1318 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 CEP152O94986 1710 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 DNAJA2O60884 412 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ANPEPP15144 967 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 LARS2Q15031 903 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 SLC34A3Q8N130 599 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 OR52K2Q8NGK3 314 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 SPATA20Q8TB22 786 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 TAS2R7Q9NYW3 318 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 RGS17Q9UGC6 210 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 KDM4BO94953 1096 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 FGBP02675 491 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ASMTP46597 345 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 CLCN3P51790 818 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 RABL6Q3YEC7 729 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 PHYKPLQ8IUZ5 450 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 RC3H2Q9HBD1 1191 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 CCDC88CQ9P219 2028 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 L7N2F9 121 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 TSPAN5P62079 268 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 VAMP2P63027 116 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 FRMD7Q6ZUT3 714 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 TMEM86AQ8N2M4 240 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 UBR7Q8N806 425 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 PTGR2Q8N8N7 351 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 AENQ8WTP8 325 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 C17orf50Q8WW18 174 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 METTL8Q9H825 291 aaKnown RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 ANKZF1Q9H8Y5 726 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 IFT80Q9P2H3 777 aaPredicted RBP8.73□□□□□ -1.01
NIPBL-201ENST00000282516 SEC14L3Q9UDX4 400 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 NOL4O94818 638 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 MICAL2O94851 1124 aa8.73□□□□□ -1.01
NIPBL-201ENST00000282516 DNTTP04053 509 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms