RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SLC25A3Q00325 362 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 ZRANB3Q5FWF4 1079 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 TRIM67Q6ZTA4 783 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 MYLIPQ8WY64 445 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 TRIB3Q96RU7 358 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 TCF25Q9BQ70 676 aa17.97■□□□□ 0.47
CAPN1-201ENST00000279247 EVLQ9UI08 416 aaPredicted RBP17.97■□□□□ 0.47
CAPN1-201ENST00000279247 SPECC1L-ADORA2AF8WAN1 911 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 ZNF195O14628 629 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 CHUKO15111 745 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 LUC7L3O95232 432 aaKnown RBP17.96■□□□□ 0.47
CAPN1-201ENST00000279247 LTA4HP09960 611 aaKnown RBP17.96■□□□□ 0.47
CAPN1-201ENST00000279247 PGM1P36871 562 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 ERVFC1P60507 584 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 SH2D4BQ5SQS7 431 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 AGAP9Q5VTM2 703 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 KLC3Q6P597 504 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 ITIH5Q86UX2 942 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 ST13P5Q8NFI4 369 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-201ENST00000279247 SHKBP1Q8TBC3 707 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 DDX50Q9BQ39 737 aaKnown RBP17.96■□□□□ 0.47
CAPN1-201ENST00000279247 PRKAG2Q9UGJ0 569 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 LNPEPQ9UIQ6 1025 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 CCL26Q9Y258 94 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 OR1I1O60431 355 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 CRTAMO95727 393 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 MYOGP15173 224 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 DBN1Q16643 649 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 MRPL57Q9BQC6 102 aaKnown RBP17.96■□□□□ 0.47
CAPN1-201ENST00000279247 POLR3BQ9NW08 1133 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-201ENST00000279247 NKX1-2Q9UD57 310 aaPredicted RBP17.96■□□□□ 0.47
CAPN1-201ENST00000279247 TAGLN3Q9UI15 199 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 CHD5Q8TDI0 1954 aa17.96■□□□□ 0.47
CAPN1-201ENST00000279247 A0A087X1B8 175 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 CSRP3P50461 194 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 RPL14P50914 215 aaKnown RBP17.96■□□□□ 0.46
CAPN1-201ENST00000279247 CDH13P55290 713 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 MTA1Q13330 715 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 PDAP1Q13442 181 aaKnown RBP17.96■□□□□ 0.46
CAPN1-201ENST00000279247 SEL1L3Q68CR1 1132 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 CHST9Q7L1S5 443 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 TAS2R42Q7RTR8 314 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 SDCCAG8Q86SQ7 713 aaPredicted RBP17.96■□□□□ 0.46
CAPN1-201ENST00000279247 CMTM8Q8IZV2 173 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 HJURPQ8NCD3 748 aaPredicted RBP17.96■□□□□ 0.46
CAPN1-201ENST00000279247 KREMEN2Q8NCW0 462 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 NCKIPSDQ9NZQ3 722 aa17.96■□□□□ 0.46
CAPN1-201ENST00000279247 LSM7Q9UK45 103 aaKnown RBP17.96■□□□□ 0.46
CAPN1-201ENST00000279247 C2orf81A6NN90 581 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 ANKRD66B4E2M5 251 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 TARM1B6A8C7 271 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 CR2P20023 1033 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 KRT72Q14CN4 511 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 PABPC1LQ4VXU2 614 aaKnown RBP17.95■□□□□ 0.46
CAPN1-201ENST00000279247 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.95■□□□□ 0.46
CAPN1-201ENST00000279247 OR6Y1Q8NGX8 325 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 SCG3Q8WXD2 468 aaKnown RBP17.95■□□□□ 0.46
CAPN1-201ENST00000279247 TCEAL4Q96EI5 215 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 DRC3Q9H069 523 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 TCF7L2Q9NQB0 619 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 PACSIN3Q9UKS6 424 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 GRXCR1A8MXD5 290 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 STX7O15400 261 aaKnown RBP17.95■□□□□ 0.46
CAPN1-201ENST00000279247 NDUFS3O75489 264 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 RHOBTB1O94844 696 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 RFC2P35250 354 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 PPM1AP35813 382 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 KPNB1Q14974 876 aaKnown RBP17.95■□□□□ 0.46
CAPN1-201ENST00000279247 TSNAXIP1Q2TAA8 658 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 PSAPL1Q6NUJ1 521 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 PIANPQ8IYJ0 282 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 LSMEM2Q8N112 164 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 TSPAN17Q96FV3 270 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 ZBP1Q9H171 429 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 CCDC68Q9H2F9 335 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 RAP2CQ9Y3L5 183 aa17.95■□□□□ 0.46
CAPN1-201ENST00000279247 LRRC14BA6NHZ5 514 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 NCF1BA6NI72 391 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-201ENST00000279247 NCF1CA8MVU1 366 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-201ENST00000279247 SRP72O76094 671 aaKnown RBP17.94■□□□□ 0.46
CAPN1-201ENST00000279247 SUPT7LO94864 414 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 COL6A2P12110 1019 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 NCF1P14598 390 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-201ENST00000279247 STK19P49842 368 aaPredicted RBP17.94■□□□□ 0.46
CAPN1-201ENST00000279247 ACCSLQ4AC99 568 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 TECRLQ5HYJ1 363 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 CATSPER2Q96P56 530 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 A8MT66 165 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 TMEM114B3SHH9 223 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 EPOP01588 193 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 FGBP02675 491 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 CTSAP10619 480 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 MC4RP32245 332 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 CD70P32970 193 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 CCR2P41597 374 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 SNX31Q8N9S9 440 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 DTX3LQ8TDB6 740 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 WDR60Q8WVS4 1066 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 PTERQ96BW5 349 aa17.94■□□□□ 0.46
CAPN1-201ENST00000279247 TUBB6Q9BUF5 446 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms