RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 FAIM2Q9BWQ8 316 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 MTF2Q9Y483 593 aaPredicted RBP11.29□□□□□ -0.6
USP6NL-201ENST00000277575 PCDHB1Q9Y5F3 818 aa11.29□□□□□ -0.6
USP6NL-201ENST00000277575 CCL22O00626 93 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ARHGEF9O43307 516 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 HSMCR30P0CW71 290 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 PIK3R1P27986 724 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 NOS3P29474 1203 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ZNF792Q3KQV3 632 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ALFQ53S48 1182 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SYPL2Q5VXT5 272 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 KIAA0408Q6ZU52 694 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 UBE2R2Q712K3 238 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 PAGE2Q7Z2X7 111 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 C7orf61Q8IZ16 206 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 BHLHE22Q8NFJ8 381 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 C2orf15Q8WU43 125 aaKnown RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 TNKS2Q9H2K2 1166 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 PCDH12Q9NPG4 1184 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 FZD10Q9ULW2 581 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 GTF2A1LQ9UNN4 478 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 KLHL20Q9Y2M5 609 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 PTPRJQ12913 1337 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 FAM47E-STBD1D6RA91 191 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 PPEF2O14830 753 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 FSBPO95073 299 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 APODP05090 189 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 KRT8P05787 483 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 EPHX1P07099 455 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SERPINA6P08185 405 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 LINC00032P0C843 101 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 CRHR1P34998 444 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 GRIA3P42263 894 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 C1DQ13901 141 aaKnown RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SLC39A4Q6P5W5 647 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 GCNT7Q6ZNI0 430 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 YTHDF3Q7Z739 585 aaKnown RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 CPNE8Q86YQ8 564 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 RP9Q8TA86 221 aaKnown RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ING5Q8WYH8 240 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 NACC2Q96BF6 587 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 VMP1Q96GC9 406 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 TEKT5Q96M29 485 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SOHLH2Q9NX45 425 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 DUSP12Q9UNI6 340 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SLC27A6Q9Y2P4 619 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 TCAF1Q9Y4C2 921 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 LRRC37A3O60309 1634 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ROBO1Q9Y6N7 1651 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SPEF2Q9C093 1822 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 H0Y858 1186 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SLC28A1O00337 649 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 TRAFD1O14545 582 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 IRAK2O43187 625 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 AOC2O75106 756 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ATP6V1C1P21283 382 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 KELP23276 732 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 POLD2P49005 469 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 HK2P52789 917 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 AP1S1P61966 158 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 IL10RBQ08334 325 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 DPYSL2Q16555 572 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ESRP1Q6NXG1 681 aaKnown RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 RAVER1Q8IY67 606 aaKnown RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 BEND7Q8N7W2 519 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 B3GALT6Q96L58 329 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 EPS8L2Q9H6S3 715 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 REEP1Q9H902 201 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 PHPT1Q9NRX4 125 aaPredicted RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 KCTD5Q9NXV2 234 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ENOPH1Q9UHY7 261 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 GGA2Q9UJY4 613 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 RWDD3Q9Y3V2 267 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 TCHHQ07283 1943 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 INSIG1O15503 277 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 CNPP09543 421 aaKnown RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SPAM1P38567 509 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 RXRGP48443 463 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 PURAQ00577 322 aaKnown RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 UBAP2LQ14157 1087 aaKnown RBP11.28□□□□□ -0.6
USP6NL-201ENST00000277575 GNA13Q14344 377 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SLC1A5Q15758 541 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ZDHHC20Q5W0Z9 365 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 CASP12Q6UXS9 341 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 TMEM110Q86TL2 294 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 CUZD1Q86UP6 607 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 CPA6Q8N4T0 437 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 NXNL1Q96CM4 212 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 RCN3Q96D15 328 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SHISA4Q96DD7 197 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 ANKRD27Q96NW4 1050 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SEMA6AQ9H2E6 1030 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 FAM83DQ9H4H8 585 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 CXorf56Q9H5V9 222 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 SPAG4Q9NPE6 437 aa11.28□□□□□ -0.6
USP6NL-201ENST00000277575 NDUFB5O43674 189 aa11.27□□□□□ -0.6
USP6NL-201ENST00000277575 PSMG1O95456 288 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms