RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 MAGEA2P43356 314 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 TAS2R41P59536 307 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 RNF220Q5VTB9 566 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 LPCAT4Q643R3 524 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 PLEKHH3Q7Z736 793 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 CLNKQ7Z7G1 428 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 OR4A15Q8NGL6 344 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 HEXDCQ8WVB3 486 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 TNFAIP8L1Q8WVP5 186 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 CLPTM1LQ96KA5 538 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 MRPL9Q9BYD2 267 aaKnown RBP8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 PCDH12Q9NPG4 1184 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 SEMA3GQ9NS98 782 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 SNTG2Q9NY99 539 aa8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 OAS3Q9Y6K5 1087 aaKnown RBP8.72□□□□□ -1.01
SCUBE3-201ENST00000274938 hCG_1818297A0A087WSY0 165 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 TUBA1BP68363 451 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 TMEM44Q2T9K0 475 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 TAPT1Q6NXT6 567 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 TUBA1AQ71U36 451 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 DNAJB7Q7Z6W7 309 aaPredicted RBP8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 C10orf107Q8IVU9 208 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 OR10H5Q8NGA6 315 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 TMEM134Q9H6X4 195 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 HACL1Q9UJ83 578 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 WDR37Q9Y2I8 494 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 TMX2Q9Y320 296 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 TRAF6Q9Y4K3 522 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 A0A0J9YYE9 177 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 CAPN8A6NHC0 703 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 AIREO43918 545 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 USP12O75317 370 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 TIPRLO75663 272 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 SNX4O95219 450 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 CHKAP35790 457 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 XKR6Q5GH73 641 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 STYK1Q6J9G0 422 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 PLCZ1Q86YW0 608 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 CRELD1Q96HD1 420 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 IL25Q9H293 177 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 CXorf21Q9HAI6 301 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 HMGXB4Q9UGU5 601 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 H3BNH8 94 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 ZBTB11O95625 1053 aaPredicted RBP8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 ANGPTL1O95841 491 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 ATF4P18848 351 aaPredicted RBP8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 GLYATQ6IB77 296 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 CNSTQ6PJW8 725 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 TRAPPC5Q8IUR0 188 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 ANKRD52Q8NB46 1076 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 C18orf25Q96B23 403 aaPredicted RBP8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 RSPH9Q9H1X1 276 aaPredicted RBP8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 ZFP14Q9HCL3 533 aa8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 PDP1Q9P0J1 537 aaPredicted RBP8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 MRTO4Q9UKD2 239 aaKnown RBP8.71□□□□□ -1.01
SCUBE3-201ENST00000274938 MCIDASD6RGH6 385 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 MTHFRP42898 656 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 SREBF2Q12772 1141 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 PDCD4Q53EL6 469 aaKnown RBP8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 USP43Q70EL4 1123 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 BRINP3Q76B58 766 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 DNAAF5Q86Y56 855 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 TMIEQ8NEW7 156 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 MYOZ2Q9NPC6 264 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 OR12D3Q9UGF7 316 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 PACSIN3Q9UKS6 424 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 KCNE2Q9Y6J6 123 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 TSPAN4O14817 238 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 SPTLC1O15269 473 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC28A2O43868 658 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 LGR5O75473 907 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 IFNA7P01567 189 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 CYP4B1P13584 511 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 BUD31P41223 144 aaPredicted RBP8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 GTF2A2P52657 109 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 MAZP56270 477 aaKnown RBP8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 SNRPD1P62314 119 aaKnown RBP8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 SLC4A11Q8NBS3 891 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 MAT2BQ9NZL9 334 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 PRAMEF33A0A0G2JMD5 474 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 FAM237AA0A1B0GTK4 181 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 FADS2P1A8MWK0 482 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 PRAMEF10O60809 474 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 CCNDBP1O95273 360 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 PEPDP12955 493 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 SEPHS1P49903 392 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 AP5B1Q2VPB7 878 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 LAPTM4BQ86VI4 370 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 IQCF2Q8IXL9 164 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 TUBGCP5Q96RT8 1024 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 NODALQ96S42 347 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 TMEM109Q9BVC6 243 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 ULBP1Q9BZM6 244 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 SPEF1Q9Y4P9 236 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 POLR3HQ9Y535 204 aaPredicted RBP8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 SALL1Q9NSC2 1324 aa8.71□□□□□ -1.02
SCUBE3-201ENST00000274938 PDCD5O14737 125 aa8.7□□□□□ -1.02
SCUBE3-201ENST00000274938 FFAR3O14843 346 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms