RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PCDH20Q8N6Y1 951 aaKnown RBP11.57□□□□□ -0.56
SCAF11-201ENST00000266589 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.57□□□□□ -0.56
SCAF11-201ENST00000266589 BPIFB1Q8TDL5 484 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 MYLIPQ8WY64 445 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 PPP2R3CQ969Q6 453 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 MRPL38Q96DV4 380 aaKnown RBP11.57□□□□□ -0.56
SCAF11-201ENST00000266589 TSPAN17Q96FV3 270 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 ASB16Q96NS5 453 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 GDF15Q99988 308 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 GPR63Q9BZJ6 419 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 CEP44Q9C0F1 390 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 HECAQ9UBI9 543 aaPredicted RBP11.57□□□□□ -0.56
SCAF11-201ENST00000266589 SLCO3A1Q9UIG8 710 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 RPL26L1Q9UNX3 145 aaKnown RBP11.57□□□□□ -0.56
SCAF11-201ENST00000266589 FNDC3AQ9Y2H6 1198 aaKnown RBP11.57□□□□□ -0.56
SCAF11-201ENST00000266589 LAMA3Q16787 3333 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 CEP290O15078 2479 aa11.57□□□□□ -0.56
SCAF11-201ENST00000266589 A0A087X1B8 175 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 A0A0J9YYE9 177 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 KLHL2O95198 593 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 TRBC1P01850 177 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 FGF3P11487 239 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 POLR2EP19388 210 aaKnown RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 SP100P23497 879 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 MC4RP32245 332 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 GLRBP48167 497 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CCNHP51946 323 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 GEN1Q17RS7 908 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 TYSND1Q2T9J0 566 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 MYLK3Q32MK0 819 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CARD16Q5EG05 197 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CCDC121Q6ZUS5 278 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 KIAA0907Q7Z7F0 614 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 KIAA1958Q8N8K9 716 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 TTC8Q8TAM2 541 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 SMARCD2Q92925 531 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ASIC4Q96FT7 647 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 SCYL1Q96KG9 808 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 RMDN2Q96LZ7 410 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 C7orf26Q96N11 449 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ZDHHC6Q9H6R6 413 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ERVW-1Q9UQF0 538 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 RUVBL2Q9Y230 463 aaKnown RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 VWA7Q9Y334 891 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 PKP3Q9Y446 797 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 SCN8AQ9UQD0 1980 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CCT8L1PA6NM43 557 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ANKRD65E5RJM6 399 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 G3V2L1 256 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 TK2O00142 265 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 LINC01565O15544 149 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ADH1CP00326 375 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 APOA4P06727 396 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 DGKGP49619 791 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CDKN2DP55273 166 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 OCRLQ01968 901 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ILF2Q12905 390 aaKnown RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 DLG1Q12959 904 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 LRRC8EQ6NSJ5 796 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 FAM45BPQ6NSW5 357 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 DPY19L3Q6ZPD9 716 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 Q6ZVU0 165 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 TRPM8Q7Z2W7 1104 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 GPR149Q86SP6 731 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 TBC1D1Q86TI0 1168 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ZSWIM9Q86XI8 627 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 SPATA6LQ8N4H0 392 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ST13P5Q8NFI4 369 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 FAM45AQ8TCE6 357 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CYB5D2Q8WUJ1 264 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 C10orf82Q8WW14 230 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 SORCS1Q8WY21 1168 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CCT6BQ92526 530 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 VOPP1Q96AW1 172 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 NXNL1Q96CM4 212 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 EID2BQ96D98 161 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ZFYVE19Q96K21 471 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 TUBGCP5Q96RT8 1024 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 PLCD4Q9BRC7 762 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 TRIM55Q9BYV6 548 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ZNF395Q9H8N7 513 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ABCF3Q9NUQ8 709 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 INTS10Q9NVR2 710 aaKnown RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 IL17CQ9P0M4 197 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CPSF2Q9P2I0 782 aaKnown RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 MID2Q9UJV3 735 aa11.56□□□□□ -0.56
SCAF11-201ENST00000266589 CORO1CQ9ULV4 474 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-201ENST00000266589 ZNF106Q9H2Y7 1883 aaKnown RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 C1orf232A0A0U1RR37 186 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 CAPN8A6NHC0 703 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 H7C0S8 307 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 HOXC11O43248 304 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 SNNO75324 88 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 ARSAP15289 507 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 HMGCLP35914 325 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 CDKN1CP49918 316 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-201ENST00000266589 RAD51Q06609 339 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 TSNAXIP1Q2TAA8 658 aa11.55□□□□□ -0.56
SCAF11-201ENST00000266589 PSAPL1Q6NUJ1 521 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms