RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 GPX6P59796 221 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 PRKCZQ05513 592 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 MPPE1Q53F39 396 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 KIAA0930Q6ICG6 404 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-201ENST00000264555 CERS6Q6ZMG9 384 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 MPP5Q8N3R9 675 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 DDHD1Q8NEL9 900 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 PSMG2Q969U7 264 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 C19orf60Q96EN9 201 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 NPAS2Q99743 824 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 APOL4Q9BPW4 351 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 KRCC1Q9NPI7 259 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-201ENST00000264555 TLR6Q9Y2C9 796 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 SLC7A4O43246 635 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 SLC22A3O75751 556 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 EPS8Q12929 822 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 PDK3Q15120 406 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 SPATA19Q7Z5L4 167 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 UBE2E3Q969T4 207 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 TPD52L3Q96J77 140 aa16.74■□□□□ 0.27
PHRF1-201ENST00000264555 ZNF317Q96PQ6 595 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-201ENST00000264555 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.74■□□□□ 0.27
PHRF1-201ENST00000264555 ZFP37Q9Y6Q3 630 aaPredicted RBP16.74■□□□□ 0.27
PHRF1-201ENST00000264555 UGT1A9O60656 530 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 EFCAB14O75071 495 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 SNAI1O95863 264 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-201ENST00000264555 FBXW4P57775 412 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 DEFA1P59665 94 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 DEFA3P59666 94 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 MAB21L3Q8N8X9 362 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 SLAIN1Q8ND83 568 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 NR1H4Q96RI1 486 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-201ENST00000264555 UGT1A7Q9HAW7 530 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 UGT1A10Q9HAW8 530 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 UGT1A8Q9HAW9 530 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 CFAP97Q9P2B7 532 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 ACADMP11310 421 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 SULT2A1Q06520 285 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 KLF1Q13351 362 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-201ENST00000264555 VWA5B1Q5TIE3 1220 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 ZDHHC20Q5W0Z9 365 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 ZNF549Q6P9A3 640 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 B3GNT9Q6UX72 402 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 AZIN2Q96A70 460 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 C1orf50Q9BV19 199 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 ZFP14Q9HCL3 533 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 TRPC4Q9UBN4 977 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 SLC12A4Q9UP95 1085 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 MRPS23Q9Y3D9 190 aaKnown RBP16.73■□□□□ 0.27
PHRF1-201ENST00000264555 TEX264Q9Y6I9 313 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 WDR47O94967 919 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 CXCL14O95715 111 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 CD99L2Q8TCZ2 262 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 C10orf82Q8WW14 230 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 GLMNQ92990 594 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 CDH22Q9UJ99 828 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 CDV3Q9UKY7 258 aaKnown RBP16.73■□□□□ 0.27
PHRF1-201ENST00000264555 NR2E3Q9Y5X4 410 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 C10orf71Q711Q0 1435 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 TBC1D3BA6NDS4 549 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 NPEPPSL1A6NEC2 478 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 FAM159BA6NKW6 160 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 MGRN1O60291 552 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 ADSLP30566 484 aaPredicted RBP16.73■□□□□ 0.27
PHRF1-201ENST00000264555 KRT20P35900 424 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 CRHR2Q13324 411 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 MTSS1LQ765P7 747 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 FBXO30Q8TB52 745 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 SUSD3Q96L08 255 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 S100A14Q9HCY8 104 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 ATAD3AQ9NVI7 634 aa16.73■□□□□ 0.27
PHRF1-201ENST00000264555 IGKV6D-21A0A0A0MT36 114 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 CTNNB1P35222 781 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 SLC7A2P52569 658 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 DOK6Q6PKX4 331 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 FSTL5Q8N475 847 aaPredicted RBP16.72■□□□□ 0.27
PHRF1-201ENST00000264555 ZNF781Q8N8C0 355 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 ENOPH1Q9UHY7 261 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 A0A0J9YYE9 177 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 A0A0U1RQF3 1178 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 TK2O00142 265 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 INSIG1O15503 277 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 SGTAO43765 313 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 CNOT3O75175 753 aaKnown RBP16.72■□□□□ 0.27
PHRF1-201ENST00000264555 GRIA1P42261 906 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 IDH3AP50213 366 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 PLCL1Q15111 1095 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 CCDC85BQ15834 202 aaPredicted RBP16.72■□□□□ 0.27
PHRF1-201ENST00000264555 LDB1Q86U70 411 aaPredicted RBP16.72■□□□□ 0.27
PHRF1-201ENST00000264555 CNTD1Q8N815 330 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 OR7D4Q8NG98 312 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 OR6K2Q8NGY2 324 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 PLD4Q96BZ4 506 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 CACNG1Q06432 222 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 BRSK1Q8TDC3 778 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 RHOBTB2Q9BYZ6 727 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 DENND2DQ9H6A0 471 aaPredicted RBP16.72■□□□□ 0.27
PHRF1-201ENST00000264555 DENND6AQ8IWF6 608 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 DSELQ8IZU8 1212 aa16.72■□□□□ 0.27
PHRF1-201ENST00000264555 CXorf40AQ8TE69 158 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms