RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 C2orf27AQ580R0 203 aa22.71■■□□□ 1.23
UFD1-201ENST00000263202 LRRC73Q5JTD7 316 aa22.71■■□□□ 1.23
UFD1-201ENST00000263202 CRTC1Q6UUV9 634 aa22.71■■□□□ 1.23
UFD1-201ENST00000263202 PACS1Q6VY07 963 aa22.71■■□□□ 1.23
UFD1-201ENST00000263202 TSPAN33Q86UF1 283 aa22.71■■□□□ 1.23
UFD1-201ENST00000263202 STMN4Q9H169 189 aaPredicted RBP22.71■■□□□ 1.23
UFD1-201ENST00000263202 MFSD1Q9H3U5 465 aa22.71■■□□□ 1.23
UFD1-201ENST00000263202 SUDS3Q9H7L9 328 aaPredicted RBP22.71■■□□□ 1.23
UFD1-201ENST00000263202 OGFRQ9NZT2 677 aa22.71■■□□□ 1.23
UFD1-201ENST00000263202 DUSP12Q9UNI6 340 aa22.71■■□□□ 1.23
UFD1-201ENST00000263202 A8MX80 341 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 UPK3BL1B0FP48 263 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 UPK3BL2E5RIL1 263 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 STX7O15400 261 aaKnown RBP22.7■■□□□ 1.22
UFD1-201ENST00000263202 METAP1P53582 386 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 SEMG2Q02383 582 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 CAMK2GQ13555 558 aaPredicted RBP22.7■■□□□ 1.22
UFD1-201ENST00000263202 NEPROQ6NW34 567 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 PARS2Q7L3T8 475 aaKnown RBP22.7■■□□□ 1.22
UFD1-201ENST00000263202 DSG4Q86SJ6 1040 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 OR6P1Q8NGX9 317 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 FAM3CQ92520 227 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 ERLEC1Q96DZ1 483 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 CPNE1Q99829 537 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 FAM167BQ9BTA0 163 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 BPIFA1Q9NP55 256 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 F5P12259 2224 aa22.7■■□□□ 1.22
UFD1-201ENST00000263202 CCDC162PA2VCL2 907 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 OR51F1A6NGY5 319 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 GOT2P00505 430 aaKnown RBP22.69■■□□□ 1.22
UFD1-201ENST00000263202 ITGB7P26010 798 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 ATP5DP30049 168 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 NTSR1P30989 418 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 MAGOHP61326 146 aaKnown RBP22.69■■□□□ 1.22
UFD1-201ENST00000263202 ZP2Q05996 745 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 PTAR1Q7Z6K3 402 aaPredicted RBP22.69■■□□□ 1.22
UFD1-201ENST00000263202 IL17RCQ8NAC3 791 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 MZB1Q8WU39 189 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 ARRDC3Q96B67 414 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 GABRG3Q99928 467 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 NSMCE4AQ9NXX6 385 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 B4GALT6Q9UBX8 382 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 PKP3Q9Y446 797 aa22.69■■□□□ 1.22
UFD1-201ENST00000263202 IQANK1A0A1B0GTG1 560 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 IL1BP01584 269 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 LHCGRP22888 699 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 GP5P40197 560 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 HADHAP40939 763 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 STRA8Q7Z7C7 330 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 TTC7BQ86TV6 843 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 MMAAQ8IVH4 418 aaKnown RBP22.68■■□□□ 1.22
UFD1-201ENST00000263202 DENND6AQ8IWF6 608 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 CALML6Q8TD86 181 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 C19orf43Q9BQ61 176 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 PCDH12Q9NPG4 1184 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 TXNDC16Q9P2K2 825 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 H7C0S8 307 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 F7P08709 466 aaPredicted RBP22.68■■□□□ 1.22
UFD1-201ENST00000263202 KRT15P19012 456 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 SLC1A2P43004 574 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 SERPINB9P50453 376 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 CTBP1Q13363 440 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 GRTP1Q5TC63 336 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 LRRC66Q68CR7 880 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 ZNF470Q6ECI4 717 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 TRABD2AQ86V40 505 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 EXOC3L1Q86VI1 746 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 MCMBPQ9BTE3 642 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 FKBPLQ9UIM3 349 aa22.68■■□□□ 1.22
UFD1-201ENST00000263202 HMX2A2RU54 273 aa22.67■■□□□ 1.22
UFD1-201ENST00000263202 C1QTNF3-AMACRE9PGA6 284 aa22.67■■□□□ 1.22
UFD1-201ENST00000263202 KLF8O95600 359 aaPredicted RBP22.67■■□□□ 1.22
UFD1-201ENST00000263202 CYP2A6P11509 494 aaPredicted RBP22.67■■□□□ 1.22
UFD1-201ENST00000263202 CD72P21854 359 aa22.67■■□□□ 1.22
UFD1-201ENST00000263202 MRPS21P82921 87 aaKnown RBP22.67■■□□□ 1.22
UFD1-201ENST00000263202 MLF2Q15773 248 aaPredicted RBP22.67■■□□□ 1.22
UFD1-201ENST00000263202 SDE2Q6IQ49 451 aa22.67■■□□□ 1.22
UFD1-201ENST00000263202 C2CD4AQ8NCU7 369 aaPredicted RBP22.67■■□□□ 1.22
UFD1-201ENST00000263202 OR4L1Q8NH43 312 aa22.67■■□□□ 1.22
UFD1-201ENST00000263202 PPP1R16AQ96I34 528 aa22.67■■□□□ 1.22
UFD1-201ENST00000263202 RBBP8Q99708 897 aa22.67■■□□□ 1.22
UFD1-201ENST00000263202 RSPH9Q9H1X1 276 aaPredicted RBP22.67■■□□□ 1.22
UFD1-201ENST00000263202 MARCH4Q9P2E8 410 aaPredicted RBP22.67■■□□□ 1.22
UFD1-201ENST00000263202 SYNCRIPO60506 623 aaKnown RBP22.66■■□□□ 1.22
UFD1-201ENST00000263202 ADAM23O75077 832 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 KRT37O76014 449 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 KRT38O76015 456 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 SNRPAP09012 282 aaKnown RBP22.66■■□□□ 1.22
UFD1-201ENST00000263202 XPAP23025 273 aaPredicted RBP22.66■■□□□ 1.22
UFD1-201ENST00000263202 NFKBIAP25963 317 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 VIPR1P32241 457 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 CSE1LP55060 971 aaKnown RBP22.66■■□□□ 1.22
UFD1-201ENST00000263202 PTSQ03393 145 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 CCINQ13939 588 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 LGSNQ5TDP6 509 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 AFTPHQ6ULP2 937 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 TRMT11Q7Z4G4 463 aaKnown RBP22.66■■□□□ 1.22
UFD1-201ENST00000263202 LMNTD2Q8IXW0 634 aa22.66■■□□□ 1.22
UFD1-201ENST00000263202 GABPB2Q8TAK5 448 aaPredicted RBP22.66■■□□□ 1.22
UFD1-201ENST00000263202 SGSM3Q96HU1 749 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms